RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 KRTAP9-6A8MVA2 160 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 CLDN25C9JDP6 229 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 H3BSA7 217 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 J3KT08 172 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 LGALS9O00182 355 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 TXNDC9O14530 226 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 RBFOX2O43251 390 aaKnown RBP eCLIP2.48□□□□□ -2.01
FN1-222ENST00000485567 ZNF682O95780 498 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 OR12D1P0DN82 309 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 ORM2P19652 201 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 OPRK1P41145 380 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 PSMB3P49720 205 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 RRAS2P62070 204 aaPredicted RBP2.48□□□□□ -2.01
FN1-222ENST00000485567 RPS28P62857 69 aaKnown RBP2.48□□□□□ -2.01
FN1-222ENST00000485567 ELF3P78545 371 aaPredicted RBP2.48□□□□□ -2.01
FN1-222ENST00000485567 RHEBQ15382 184 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 SSX1Q16384 188 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 LINC00483Q53H64 154 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 IBA57Q5T440 356 aaKnown RBP2.48□□□□□ -2.01
FN1-222ENST00000485567 HES3Q5TGS1 186 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 FA2HQ7L5A8 372 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 MDP1Q86V88 176 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 KRTCAP2Q8N6L1 136 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 OR4K15Q8NH41 348 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 MBD3L1Q8WWY6 194 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 STARD4Q96DR4 205 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 C14orf144Q96I85 54 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 TMEM126AQ9H061 195 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 CXorf21Q9HAI6 301 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 CA10Q9NS85 328 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 MED11Q9P086 117 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 U3KQ87 197 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 NPHP4O75161 1426 aaPredicted RBP2.48□□□□□ -2.01
FN1-222ENST00000485567 TNS2Q63HR2 1409 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 PIKFYVEQ9Y2I7 2098 aa2.48□□□□□ -2.01
FN1-222ENST00000485567 KDM5BQ9UGL1 1544 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 TET2Q6N021 2002 aaPredicted RBP2.47□□□□□ -2.01
FN1-222ENST00000485567 ZNF518AQ6AHZ1 1483 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 TRAV36DV7A0A075B6V5 113 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 hCG_1818297A0A087WSY0 165 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 TRAV8-1A0A0A6YYK1 113 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 IGHV3-72A0A0B4J1Y9 119 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 IGKV6-21A0A0C4DH24 114 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 IGHV7-4-1A0A0J9YVY3 117 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 LOC102725191A0A1B0GVB3 256 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 OR4C45A6NMZ5 311 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 A8MT66 165 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 TMEM250H0YL14 139 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 COX7A2P2O60397 106 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 PFDN1O60925 122 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 GADD45GO95257 159 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 NDUFC2O95298 119 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 IFNA10P01566 189 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 IGHV3-11P01762 117 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 APOA2P02652 100 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 SOD3P08294 240 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 ADRA2AP08913 450 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 SMIM6P0DI80 62 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 CTSEP14091 401 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 IL1RNP18510 177 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 ATP5G3P48201 142 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 PIGPP57054 158 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 LINC00313P59037 77 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 KRTAP12-2P59991 146 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 EBI3Q14213 229 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 NEDD8Q15843 81 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 RNASE13Q5GAN3 156 aaKnown RBP2.47□□□□□ -2.01
FN1-222ENST00000485567 HRCT1Q6UXD1 115 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 TMEM86AQ8N2M4 240 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 ZNF615Q8N8J6 731 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 TSTD1Q8NFU3 115 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 OR1J4Q8NGS1 313 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 OR13C4Q8NGS5 318 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 CANT1Q8WVQ1 401 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 C1orf54Q8WWF1 131 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 FRZBQ92765 325 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 GPR146Q96CH1 333 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 PLEKHB2Q96CS7 222 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 IGF2BP2-AS1Q96M15 143 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 CNBD2Q96M20 576 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 ERMAPQ96PL5 475 aaPredicted RBP2.47□□□□□ -2.01
FN1-222ENST00000485567 DOHHQ9BU89 302 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 TBL1XR1Q9BZK7 514 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 C20orf27Q9GZN8 174 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 CHST6Q9GZX3 395 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 POPDC3Q9HBV1 291 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 C8orf17Q9NRJ1 99 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 CYSLTR1Q9Y271 337 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 PRRC2AP48634 2157 aaKnown RBP2.47□□□□□ -2.01
FN1-222ENST00000485567 ABCC12Q96J65 1359 aa2.47□□□□□ -2.01
FN1-222ENST00000485567 NACAE9PAV3 2078 aa2.46□□□□□ -2.01
FN1-222ENST00000485567 DENND4BO75064 1496 aaPredicted RBP2.46□□□□□ -2.02
FN1-222ENST00000485567 DCCP43146 1447 aa2.46□□□□□ -2.02
FN1-222ENST00000485567 IGLV4-60A0A075B6I1 120 aa2.46□□□□□ -2.02
FN1-222ENST00000485567 A0A096LPI6 279 aa2.46□□□□□ -2.02
FN1-222ENST00000485567 A0A1B0GX51 115 aa2.46□□□□□ -2.02
FN1-222ENST00000485567 CD300LBA8K4G0 201 aa2.46□□□□□ -2.02
FN1-222ENST00000485567 F5H5P2 479 aa2.46□□□□□ -2.02
FN1-222ENST00000485567 M0R381 172 aa2.46□□□□□ -2.02
FN1-222ENST00000485567 GNG7O60262 68 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms