RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 MOSP00540 346 aa17.48■□□□□ 0.39
NECAB3-211ENST00000485399 HRASP01112 189 aa17.48■□□□□ 0.39
NECAB3-211ENST00000485399 IGKV1D-33P01593 117 aa17.48■□□□□ 0.39
NECAB3-211ENST00000485399 IGKV1-33P01594 117 aa17.48■□□□□ 0.39
NECAB3-211ENST00000485399 RPS16P62249 146 aaKnown RBP17.48■□□□□ 0.39
NECAB3-211ENST00000485399 HES1Q14469 280 aa17.48■□□□□ 0.39
NECAB3-211ENST00000485399 TMEM268Q5VZI3 342 aa17.48■□□□□ 0.39
NECAB3-211ENST00000485399 SELENOHQ8IZQ5 122 aaKnown RBP17.48■□□□□ 0.39
NECAB3-211ENST00000485399 PRDM13Q9H4Q3 707 aa17.48■□□□□ 0.39
NECAB3-211ENST00000485399 DUXBA0A1W2PPF3 345 aa17.47■□□□□ 0.39
NECAB3-211ENST00000485399 SHOXO15266 292 aa17.47■□□□□ 0.39
NECAB3-211ENST00000485399 LGALS7P47929 136 aa17.47■□□□□ 0.39
NECAB3-211ENST00000485399 KRTAP24-1Q3LI83 254 aa17.47■□□□□ 0.39
NECAB3-211ENST00000485399 LHFPL5Q8TAF8 219 aa17.47■□□□□ 0.39
NECAB3-211ENST00000485399 EAF1Q96JC9 268 aaPredicted RBP17.47■□□□□ 0.39
NECAB3-211ENST00000485399 HARBI1Q96MB7 349 aa17.47■□□□□ 0.39
NECAB3-211ENST00000485399 NBEAL1Q6ZS30 2694 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 MDFIC2A0A1B0GVS7 189 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 SSNA1O43805 119 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 IGKV1-39P01597 117 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 IGKV1D-39P04432 117 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 NQO2P16083 231 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 SRD5A1P18405 259 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 CD24P25063 80 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 LIN54Q6MZP7 749 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 Q6YL49 198 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 UXS1Q8NBZ7 420 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 R3HDM4Q96D70 268 aa17.46■□□□□ 0.39
NECAB3-211ENST00000485399 TSNAXQ99598 290 aaKnown RBP17.46■□□□□ 0.39
NECAB3-211ENST00000485399 ERVK-16P61578 105 aa17.45■□□□□ 0.38
NECAB3-211ENST00000485399 TUSC1Q2TAM9 212 aa17.45■□□□□ 0.38
NECAB3-211ENST00000485399 DBX1A6NMT0 343 aa17.44■□□□□ 0.38
NECAB3-211ENST00000485399 H3BUX3 64 aa17.44■□□□□ 0.38
NECAB3-211ENST00000485399 KRASP01116 189 aa17.44■□□□□ 0.38
NECAB3-211ENST00000485399 TMEM11P17152 192 aa17.44■□□□□ 0.38
NECAB3-211ENST00000485399 HNF4GQ14541 408 aa17.44■□□□□ 0.38
NECAB3-211ENST00000485399 POU2AF1Q16633 256 aa17.44■□□□□ 0.38
NECAB3-211ENST00000485399 SLC35G3Q8N808 338 aa17.44■□□□□ 0.38
NECAB3-211ENST00000485399 DMBX1Q8NFW5 382 aa17.44■□□□□ 0.38
NECAB3-211ENST00000485399 PIFOQ8TCI5 191 aa17.44■□□□□ 0.38
NECAB3-211ENST00000485399 RBMXL1Q96E39 390 aaKnown RBP17.44■□□□□ 0.38
NECAB3-211ENST00000485399 RRNAD1Q96FB5 475 aaKnown RBP17.44■□□□□ 0.38
NECAB3-211ENST00000485399 SEC22AQ96IW7 307 aa17.44■□□□□ 0.38
NECAB3-211ENST00000485399 ZNF48Q96MX3 618 aaPredicted RBP17.44■□□□□ 0.38
NECAB3-211ENST00000485399 MARCH11A6NNE9 402 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 IFNA21P01568 189 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 VDAC1P21796 283 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 G6PCP35575 357 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 IER3P46695 156 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 AKR1C2P52895 323 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 LYZL2Q7Z4W2 148 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 Q8N6K4 173 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 OR5R1Q8NH85 324 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 RNASE11Q8TAA1 199 aaKnown RBP17.43■□□□□ 0.38
NECAB3-211ENST00000485399 RHOVQ96L33 236 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 MED28Q9H204 178 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 RAB18Q9NP72 206 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 PITPNC1Q9UKF7 332 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 TMED3Q9Y3Q3 217 aa17.43■□□□□ 0.38
NECAB3-211ENST00000485399 BTBD17A6NE02 478 aa17.42■□□□□ 0.38
NECAB3-211ENST00000485399 SRRM4A7MD48 611 aaKnown RBP17.42■□□□□ 0.38
NECAB3-211ENST00000485399 SPDEFO95238 335 aa17.42■□□□□ 0.38
NECAB3-211ENST00000485399 HOXB5P09067 269 aa17.42■□□□□ 0.38
NECAB3-211ENST00000485399 VMA21Q3ZAQ7 101 aa17.42■□□□□ 0.38
NECAB3-211ENST00000485399 RBMS3Q6XE24 437 aaKnown RBP17.42■□□□□ 0.38
NECAB3-211ENST00000485399 FAM219AQ8IW50 185 aa17.42■□□□□ 0.38
NECAB3-211ENST00000485399 CADM3Q8N126 398 aa17.42■□□□□ 0.38
NECAB3-211ENST00000485399 SIGLECL1Q8N7X8 197 aa17.42■□□□□ 0.38
NECAB3-211ENST00000485399 OR8H1Q8NGG4 311 aa17.42■□□□□ 0.38
NECAB3-211ENST00000485399 LSM10Q969L4 123 aaKnown RBP17.42■□□□□ 0.38
NECAB3-211ENST00000485399 RITA1Q96K30 269 aa17.42■□□□□ 0.38
NECAB3-211ENST00000485399 C1RLQ9NZP8 487 aa17.42■□□□□ 0.38
NECAB3-211ENST00000485399 IGKV1-5P01602 117 aa17.41■□□□□ 0.38
NECAB3-211ENST00000485399 H2BFWTQ7Z2G1 175 aa17.41■□□□□ 0.38
NECAB3-211ENST00000485399 NPBQ8NG41 125 aa17.41■□□□□ 0.38
NECAB3-211ENST00000485399 VSTM2AQ8TAG5 236 aa17.41■□□□□ 0.38
NECAB3-211ENST00000485399 SSMEM1Q8WWF3 244 aa17.41■□□□□ 0.38
NECAB3-211ENST00000485399 KIAA1456Q9P272 454 aa17.41■□□□□ 0.38
NECAB3-211ENST00000485399 TCF19Q9Y242 345 aa17.41■□□□□ 0.38
NECAB3-211ENST00000485399 MMP24Q9Y5R2 645 aa17.41■□□□□ 0.38
NECAB3-211ENST00000485399 A6NDX4 124 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 NBR2O15453 112 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 IGLV2-23P01705 113 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 IGHV4-59P01825 116 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 UBE2KP61086 200 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 RRAS2P62070 204 aaPredicted RBP17.4■□□□□ 0.38
NECAB3-211ENST00000485399 PSG5Q15238 335 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 MMDQ15546 238 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 GGNBP1Q5YKI7 109 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 SSX9Q7RTT3 188 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 VKORC1L1Q8N0U8 176 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 TEX45Q8NA69 505 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 ADAP1O75689 374 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 OR2A4O95047 310 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 SAA1P0DJI8 122 aaPredicted RBP17.4■□□□□ 0.38
NECAB3-211ENST00000485399 HLA-GP17693 338 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 CNTFRP26992 372 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 F2RL1P55085 397 aa17.4■□□□□ 0.38
NECAB3-211ENST00000485399 SRSF2Q01130 221 aaKnown RBP17.4■□□□□ 0.38
NECAB3-211ENST00000485399 FBLN7Q53RD9 439 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms