RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 DYNAPQ8N1N2 210 aa0.26□□□□□ -2.37
CCDC66-219ENST00000484441 STOML3Q8TAV4 291 aa0.26□□□□□ -2.37
CCDC66-219ENST00000484441 RNASEH2CQ8TDP1 164 aaKnown RBP0.26□□□□□ -2.37
CCDC66-219ENST00000484441 NMNAT3Q96T66 252 aa0.26□□□□□ -2.37
CCDC66-219ENST00000484441 REG4Q9BYZ8 158 aa0.26□□□□□ -2.37
CCDC66-219ENST00000484441 CHST6Q9GZX3 395 aa0.26□□□□□ -2.37
CCDC66-219ENST00000484441 CREBBPQ92793 2442 aa0.26□□□□□ -2.37
CCDC66-219ENST00000484441 PKD1L2Q7Z442 2459 aa0.26□□□□□ -2.37
CCDC66-219ENST00000484441 ZFYVE26Q68DK2 2539 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 MAP3K19Q56UN5 1328 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 TRAV38-1A0A0B4J264 116 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 CREBL2O60519 120 aaPredicted RBP0.25□□□□□ -2.37
CCDC66-219ENST00000484441 BRI3O95415 125 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 IVLP07476 585 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 RNASE3P12724 160 aaKnown RBP0.25□□□□□ -2.37
CCDC66-219ENST00000484441 TMEM33P57088 247 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 RAB14P61106 215 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 C10orf55Q5SWW7 151 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 GPHB5Q86YW7 130 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 TMEM208Q9BTX3 173 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 PARVAQ9NVD7 372 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 SNURFQ9Y675 71 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 LHFPL6Q9Y693 200 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 KMT2DO14686 5537 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 HEATR5AQ86XA9 2040 aa0.25□□□□□ -2.37
CCDC66-219ENST00000484441 LAMA4Q16363 1823 aa0.24□□□□□ -2.37
CCDC66-219ENST00000484441 RYR1P21817 5038 aa0.24□□□□□ -2.37
CCDC66-219ENST00000484441 RIF1Q5UIP0 2472 aaKnown RBP0.24□□□□□ -2.37
CCDC66-219ENST00000484441 NAV2Q8IVL1 2488 aa0.24□□□□□ -2.37
CCDC66-219ENST00000484441 NCOR1O75376 2440 aa0.24□□□□□ -2.37
CCDC66-219ENST00000484441 MEIS3P1A6NDR6 274 aa0.24□□□□□ -2.37
CCDC66-219ENST00000484441 CCL5P13501 91 aa0.24□□□□□ -2.37
CCDC66-219ENST00000484441 UMODL1-AS1Q8N2C9 162 aa0.24□□□□□ -2.37
CCDC66-219ENST00000484441 TMEM86AQ8N2M4 240 aa0.24□□□□□ -2.37
CCDC66-219ENST00000484441 RPP25LQ8N5L8 163 aaKnown RBP0.24□□□□□ -2.37
CCDC66-219ENST00000484441 ASCL3Q9NQ33 180 aa0.24□□□□□ -2.37
CCDC66-219ENST00000484441 ZFC3H1O60293 1989 aaKnown RBP0.24□□□□□ -2.37
CCDC66-219ENST00000484441 DSTQ03001 7570 aaKnown RBP0.24□□□□□ -2.37
CCDC66-219ENST00000484441 NEBP20929 6669 aa0.24□□□□□ -2.37
CCDC66-219ENST00000484441 NUP160Q12769 1436 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 JMJD1CQ15652 2540 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 TMEM94Q12767 1356 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 TONSLQ96HA7 1378 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 GOLGA6L10A6NI86 522 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 H3BT86 120 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 CCDC172P0C7W6 258 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 AP1S1P61966 158 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 FABP5Q01469 135 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 FBXO48Q5FWF7 155 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 ZNF439Q8NDP4 499 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 NSD1Q96L73 2696 aaPredicted RBP0.23□□□□□ -2.37
CCDC66-219ENST00000484441 TEP1Q99973 2627 aaKnown RBP0.23□□□□□ -2.37
CCDC66-219ENST00000484441 SYNE2Q8WXH0 6885 aaKnown RBP0.23□□□□□ -2.37
CCDC66-219ENST00000484441 SPTBN4Q9H254 2564 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 CHD8Q9HCK8 2581 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 BSNQ9UPA5 3926 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 ZNF462Q96JM2 2506 aa0.23□□□□□ -2.37
CCDC66-219ENST00000484441 PCLOQ9Y6V0 5065 aa0.22□□□□□ -2.37
CCDC66-219ENST00000484441 ACANP16112 2415 aa0.22□□□□□ -2.37
CCDC66-219ENST00000484441 MIPP30301 263 aa0.22□□□□□ -2.37
CCDC66-219ENST00000484441 AKR1C1Q04828 323 aa0.22□□□□□ -2.37
CCDC66-219ENST00000484441 GNA13Q14344 377 aa0.22□□□□□ -2.37
CCDC66-219ENST00000484441 SYCP1Q15431 976 aa0.22□□□□□ -2.37
CCDC66-219ENST00000484441 COPS6Q7L5N1 327 aa0.22□□□□□ -2.37
CCDC66-219ENST00000484441 CNPY4Q8N129 248 aa0.22□□□□□ -2.37
CCDC66-219ENST00000484441 MRPL57Q9BQC6 102 aaKnown RBP0.22□□□□□ -2.37
CCDC66-219ENST00000484441 PCYT1BQ9Y5K3 369 aaPredicted RBP0.22□□□□□ -2.37
CCDC66-219ENST00000484441 HIVEP1P15822 2718 aa0.22□□□□□ -2.37
CCDC66-219ENST00000484441 GLI3P10071 1580 aa0.22□□□□□ -2.37
CCDC66-219ENST00000484441 SETD2Q9BYW2 2564 aaPredicted RBP0.22□□□□□ -2.37
CCDC66-219ENST00000484441 FASNP49327 2511 aaKnown RBP0.22□□□□□ -2.37
CCDC66-219ENST00000484441 EP300Q09472 2414 aaPredicted RBP0.22□□□□□ -2.37
CCDC66-219ENST00000484441 SETD5Q9C0A6 1442 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 FLT4P35916 1363 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 PIEZO1Q92508 2521 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 A0A1B0GW54 56 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 APOA1P02647 267 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 LINC00614P0C842 121 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 HPCAP84074 193 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 BLIDQ8IZY5 108 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 OR10D3Q8NH80 312 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 PPCDCQ96CD2 204 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 CYTH2Q99418 400 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 COL6A3P12111 3177 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 FSIP2Q5CZC0 6907 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 KMT2CQ8NEZ4 4911 aaKnown RBP0.21□□□□□ -2.38
CCDC66-219ENST00000484441 UBR4Q5T4S7 5183 aa0.21□□□□□ -2.38
CCDC66-219ENST00000484441 USP9YO00507 2555 aaPredicted RBP0.2□□□□□ -2.38
CCDC66-219ENST00000484441 POLQO75417 2590 aa0.2□□□□□ -2.38
CCDC66-219ENST00000484441 ATP8B1O43520 1251 aa0.2□□□□□ -2.38
CCDC66-219ENST00000484441 TFPTP0C1Z6 253 aa0.2□□□□□ -2.38
CCDC66-219ENST00000484441 TRGC1P0CF51 173 aa0.2□□□□□ -2.38
CCDC66-219ENST00000484441 PVALBP20472 110 aaPredicted RBP0.2□□□□□ -2.38
CCDC66-219ENST00000484441 REG1BP48304 166 aa0.2□□□□□ -2.38
CCDC66-219ENST00000484441 C4orf26Q17RF5 130 aa0.2□□□□□ -2.38
CCDC66-219ENST00000484441 FAM45BPQ6NSW5 357 aa0.2□□□□□ -2.38
CCDC66-219ENST00000484441 ZNF565Q8N9K5 539 aa0.2□□□□□ -2.38
CCDC66-219ENST00000484441 C12orf43Q96C57 262 aaKnown RBP0.2□□□□□ -2.38
CCDC66-219ENST00000484441 MROQ9BYG7 248 aa0.2□□□□□ -2.38
CCDC66-219ENST00000484441 METTL9Q9H1A3 318 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms