RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 C11orf98E9PRG8 122 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 SNAI2O43623 268 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 MT-ND6P03923 174 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 COX19Q49B96 90 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 OR4C12Q96R67 309 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 MBNL3Q9NUK0 354 aaKnown RBP6.59□□□□□ -1.35
COL4A5-205ENST00000483338 TBC1D29Q9UFV1 150 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 UBE2J1Q9Y385 318 aaPredicted RBP6.59□□□□□ -1.35
COL4A5-205ENST00000483338 ZNF816-ZNF321PA0A0X1KG74 233 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 hCG_38984A0A1B0GV85 526 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 K7EN84 100 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 HSBP1O75506 76 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 CA1P00915 261 aaPredicted RBP6.59□□□□□ -1.35
COL4A5-205ENST00000483338 APOA2P02652 100 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 FBXW4P57775 412 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 TRIP6Q15654 476 aaKnown RBP6.59□□□□□ -1.35
COL4A5-205ENST00000483338 ZNF585BQ52M93 769 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 ZNF611Q8N823 705 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 RNF133Q8WVZ7 376 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 TAF15Q92804 592 aaKnown RBP eCLIP6.59□□□□□ -1.35
COL4A5-205ENST00000483338 LSM10Q969L4 123 aaKnown RBP6.59□□□□□ -1.35
COL4A5-205ENST00000483338 HSPB8Q9UJY1 196 aa6.59□□□□□ -1.35
COL4A5-205ENST00000483338 A0A0J9YY10 115 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 A0A1B0GX78 115 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 J3QR89 54 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 CRXO43186 299 aaPredicted RBP6.58□□□□□ -1.36
COL4A5-205ENST00000483338 CISD3P0C7P0 127 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 SLC35B1P78383 322 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 EIF3IQ13347 325 aaKnown RBP6.58□□□□□ -1.36
COL4A5-205ENST00000483338 RPEL1Q2QD12 228 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 CRIP3Q6Q6R5 217 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 C8orf86Q6ZUL3 223 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 OOSP2Q86WS3 158 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 TPRX1Q8N7U7 411 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 OR8B12Q8NGG6 310 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 OR51E1Q8TCB6 317 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 PBOV1Q9GZY1 135 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 CENPMQ9NSP4 180 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 TMEM74BQ9NUR3 256 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 A6NDN8 102 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 PRNPP04156 253 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 REG1BP48304 166 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 SRSF6Q13247 344 aaKnown RBP6.58□□□□□ -1.36
COL4A5-205ENST00000483338 RLN3Q8WXF3 142 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 DDB2Q92466 427 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 COA3Q9Y2R0 106 aaPredicted RBP6.58□□□□□ -1.36
COL4A5-205ENST00000483338 PTRH2Q9Y3E5 179 aaKnown RBP6.58□□□□□ -1.36
COL4A5-205ENST00000483338 UBE2L5PA0A1B0GUS4 154 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 HELTA6NFD8 242 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 MT-ATP6P00846 226 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 CT62P0C5K7 136 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 LINC00271P0C7V0 271 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 PEBP1P30086 187 aaKnown RBP6.58□□□□□ -1.36
COL4A5-205ENST00000483338 GNG4P50150 75 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 TMPRSS3P57727 454 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 WFDC2Q14508 124 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 OR10G9Q8NGN4 311 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 OR10G7Q8NGN6 311 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 OR52E5Q8NH55 327 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 OR2T6Q8NHC8 308 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 LMX1AQ8TE12 382 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 CLDN23Q96B33 292 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 ZNF524Q96C55 264 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 C5orf30Q96GV9 206 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 SRSF8Q9BRL6 282 aaKnown RBP6.58□□□□□ -1.36
COL4A5-205ENST00000483338 RAB1BQ9H0U4 201 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 IL21Q9HBE4 155 aa6.58□□□□□ -1.36
COL4A5-205ENST00000483338 RANBP2P49792 3224 aaKnown RBP6.57□□□□□ -1.36
COL4A5-205ENST00000483338 IGKV1-9A0A0C4DH69 117 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 DXOO77932 396 aaKnown RBP6.57□□□□□ -1.36
COL4A5-205ENST00000483338 SPINK8P0C7L1 97 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 INSL3P51460 131 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 PRDX1Q06830 199 aaKnown RBP6.57□□□□□ -1.36
COL4A5-205ENST00000483338 DLX2Q07687 328 aaPredicted RBP6.57□□□□□ -1.36
COL4A5-205ENST00000483338 PRICKLE4Q2TBC4 344 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 ZNF562Q6V9R5 426 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 TBC1D26Q86UD7 250 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 OR2A1Q8NGT9 310 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 TECRQ9NZ01 308 aaKnown RBP6.57□□□□□ -1.36
COL4A5-205ENST00000483338 WNT16Q9UBV4 365 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 ZNF257Q9Y2Q1 563 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 CABIN1Q9Y6J0 2220 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 TRAV38-1A0A0B4J264 116 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 A0A0G2JRQ6 117 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 PRR33A8MZF0 331 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 PRKNO60260 465 aaPredicted RBP6.57□□□□□ -1.36
COL4A5-205ENST00000483338 NEURL1O76050 574 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 HBZP02008 142 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 FABP2P12104 132 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 CX3CL1P78423 397 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 ZNF542PQ5EBM4 170 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 FAM120AOSQ5T036 256 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 SHISA6Q6ZSJ9 500 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 LINC00173Q6ZV60 143 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 SH2D6Q7Z4S9 175 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 CDX2Q99626 313 aaPredicted RBP6.57□□□□□ -1.36
COL4A5-205ENST00000483338 LRRK1Q38SD2 2015 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 LIPT2A6NK58 231 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 IAPPP10997 89 aa6.57□□□□□ -1.36
COL4A5-205ENST00000483338 BPIFA4PQ86YQ2 179 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms