RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 WDR25Q64LD2 544 aaPredicted RBP11.6□□□□□ -0.55
PHF3-204ENST00000481385 FAM216BQ8N7L0 139 aa11.6□□□□□ -0.55
PHF3-204ENST00000481385 FAM57AQ8TBR7 257 aa11.6□□□□□ -0.55
PHF3-204ENST00000481385 FAM222BQ8WU58 562 aa11.6□□□□□ -0.55
PHF3-204ENST00000481385 DDB2Q92466 427 aa11.6□□□□□ -0.55
PHF3-204ENST00000481385 SDF2L1Q9HCN8 221 aa11.6□□□□□ -0.55
PHF3-204ENST00000481385 ZNRD1Q9P1U0 126 aa11.6□□□□□ -0.55
PHF3-204ENST00000481385 APC2O95996 2303 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 ACACAQ13085 2346 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 SAA2-SAA4A0A096LPE2 208 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 MMP23AO75900 390 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 SAA2P0DJI9 122 aaPredicted RBP11.59□□□□□ -0.55
PHF3-204ENST00000481385 COL8A2P25067 703 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 CD40P25942 277 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 GATA4P43694 442 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 RELBQ01201 579 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 STUMQ69YW2 141 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 ZCCHC24Q8N2G6 241 aaKnown RBP11.59□□□□□ -0.55
PHF3-204ENST00000481385 PPP1R35Q8TAP8 253 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 GAFA1Q96PS6 74 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 CCL13Q99616 98 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 DSCAML1Q8TD84 2053 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 CUL9Q8IWT3 2517 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 GYPAP02724 150 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 TNFAIP6P98066 277 aaPredicted RBP11.59□□□□□ -0.55
PHF3-204ENST00000481385 C1QL4Q86Z23 238 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 RAB24Q969Q5 203 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 SEBOXQ9HB31 216 aaPredicted RBP11.59□□□□□ -0.55
PHF3-204ENST00000481385 TMEM140Q9NV12 185 aa11.59□□□□□ -0.55
PHF3-204ENST00000481385 C3orf36Q3SXR2 165 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 SLC16A13Q7RTY0 426 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 P2RX4Q99571 388 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 ZNF251Q9BRH9 671 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 RNF7Q9UBF6 113 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 METTL1Q9UBP6 276 aaKnown RBP11.58□□□□□ -0.56
PHF3-204ENST00000481385 A0A0G2JNJ9 132 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 CTXND1A0A1B0GTU2 59 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 CRYABP02511 175 aaKnown RBP11.58□□□□□ -0.56
PHF3-204ENST00000481385 MYOD1P15172 320 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 VDAC2P45880 294 aaPredicted RBP11.58□□□□□ -0.56
PHF3-204ENST00000481385 MEF2BQ02080 365 aaPredicted RBP11.58□□□□□ -0.56
PHF3-204ENST00000481385 NCMAPQ5T1S8 102 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 ABHD12Q8N2K0 398 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 OR4A16Q8NH70 328 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 S1PR3Q99500 378 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 GFOD1Q9NXC2 390 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 Q9UFV3 132 aa11.58□□□□□ -0.56
PHF3-204ENST00000481385 KBTBD11-OT1A0A1B0GTJ5 212 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 ZNF674Q2M3X9 581 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 SDSLQ96GA7 329 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 SIRT7Q9NRC8 400 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 IL19Q9UHD0 177 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 TRAV38-1A0A0B4J264 116 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 PRSS46E5RG02 174 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 CYB5BO43169 146 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 GFRA3O60609 400 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 CD1BP29016 333 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 GNG10P50151 68 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 DOLPP1Q86YN1 238 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 IQCF2Q8IXL9 164 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 ABHD17AQ96GS6 310 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 SH3BGRL2Q9UJC5 107 aa11.57□□□□□ -0.56
PHF3-204ENST00000481385 IFNA10P01566 189 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 SPCS3P61009 180 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 CCL8P80075 99 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 PMS2P11Q13670 270 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 ZNF383Q8NA42 475 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 RPUSD4Q96CM3 377 aaKnown RBP11.56□□□□□ -0.56
PHF3-204ENST00000481385 C1orf159Q96HA4 380 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 WDR83OSQ9Y284 106 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 PCNX1Q96RV3 2341 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 CXorf65A6NEN9 183 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 AP4M1O00189 453 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 RBFOX2O43251 390 aaKnown RBP eCLIP11.56□□□□□ -0.56
PHF3-204ENST00000481385 IFNA1P01562 189 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 ZNF439Q8NDP4 499 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 HEYLQ9NQ87 328 aaPredicted RBP11.56□□□□□ -0.56
PHF3-204ENST00000481385 SMCO3A2RU48 225 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 CLN5O75503 358 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 FCN3O75636 299 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 TDGF1P3P51864 188 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 KIAA0141Q14154 515 aaPredicted RBP11.56□□□□□ -0.56
PHF3-204ENST00000481385 TREML4Q6UXN2 200 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 LYG1Q8N1E2 194 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 SMIM7Q9BQ49 75 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 TP53TG5Q9Y2B4 290 aa11.56□□□□□ -0.56
PHF3-204ENST00000481385 FAM90A9PA6NNJ1 464 aa11.55□□□□□ -0.56
PHF3-204ENST00000481385 B4DEV8 164 aa11.55□□□□□ -0.56
PHF3-204ENST00000481385 PAGE4O60829 102 aa11.55□□□□□ -0.56
PHF3-204ENST00000481385 YIF1AO95070 293 aa11.55□□□□□ -0.56
PHF3-204ENST00000481385 NUBP1P53384 320 aa11.55□□□□□ -0.56
PHF3-204ENST00000481385 PNRC1Q12796 327 aaPredicted RBP11.55□□□□□ -0.56
PHF3-204ENST00000481385 KRTCAP3Q53RY4 240 aa11.55□□□□□ -0.56
PHF3-204ENST00000481385 ZNF788Q6ZQV5 615 aa11.55□□□□□ -0.56
PHF3-204ENST00000481385 CISD2Q8N5K1 135 aaKnown RBP11.55□□□□□ -0.56
PHF3-204ENST00000481385 ZNF709Q8N972 641 aa11.55□□□□□ -0.56
PHF3-204ENST00000481385 Q8NA96 180 aa11.55□□□□□ -0.56
PHF3-204ENST00000481385 NANPQ8TBE9 248 aa11.55□□□□□ -0.56
PHF3-204ENST00000481385 ACTR3CQ9C0K3 210 aaPredicted RBP11.55□□□□□ -0.56
PHF3-204ENST00000481385 TCF19Q9Y242 345 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms