RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	RAB5B	P61020	215 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	NAA20	P61599	178 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	TBPL1	P62380	186 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	HIST1H4A	P62805	103 aa	Known RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	FKBP1A	P62942	108 aa	Known RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	BASP1	P80723	227 aa	Known RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	IFITM2	Q01629	132 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	PRDX4	Q13162	271 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	EDDM3A	Q14507	147 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	PABPC1L2A	Q5JQF8	200 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	SAPCD1	Q5SSQ6	148 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	C8orf74	Q6P047	294 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	SBSN	Q6UWP8	590 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	SDIM1	Q6ZPB5	146 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	ZNF767P	Q75MW2	155 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	SLC35E3	Q7Z769	313 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	LYPD6	Q86Y78	171 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	ZNF567	Q8N184	647 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	SLC22A24	Q8N4F4	322 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	TMEM156	Q8N614	296 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	YIPF7	Q8N8F6	280 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173		Q8NAQ8	132 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR2T27	Q8NH04	317 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	OR5J2	Q8NH18	312 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	RAB2B	Q8WUD1	216 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	BORCS7	Q96B45	105 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	C8orf76	Q96K31	380 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	CNBD2	Q96M20	576 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	CCL13	Q99616	98 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	PECR	Q9BY49	303 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	GNB1L	Q9BYB4	327 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	TRIM4	Q9C037	500 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	AICDA	Q9GZX7	198 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	PSTPIP2	Q9H939	334 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	XAGE1A	Q9HD64	81 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	NDUFB11	Q9NX14	153 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	TAAR3P	Q9P1P4	343 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	PSORS1C2	Q9UIG4	136 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	SLC22A13	Q9Y226	551 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	ARL2BP	Q9Y2Y0	163 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	MRPS16	Q9Y3D3	137 aa	Known RBP	0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	TIMM9	Q9Y5J7	89 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	NUP160	Q12769	1436 aa		0.72	□□□□□ -2.29
CCNL1-223	ENST00000481173	TENM3	Q9P273	2699 aa		0.71	□□□□□ -2.29
CCNL1-223	ENST00000481173	NUP205	Q92621	2012 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	ARAP3	Q8WWN8	1544 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	IGKV1D-37	A0A075B6S9	117 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	IGHV3-15	A0A0B4J1V0	119 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	TRGV4	A0A0C4DH28	118 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	IRGM	A1A4Y4	181 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	C17orf98	A8MV24	154 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR11H12	B2RN74	326 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173		M0R381	172 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	TRAPPC3	O43617	180 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	KLRC4	O43908	158 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	HLA-DRA	P01903	254 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	CGB3	P0DN86	165 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	CGB7	P0DN87	165 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	ZNF7	P17097	686 aa	Predicted RBP	0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	ALOX5AP	P20292	161 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	NFYA	P23511	347 aa	Predicted RBP	0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	CD24	P25063	80 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	PSMB8	P28062	276 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	S100A7	P31151	101 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	CSN1S1	P47710	185 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	RAB13	P51153	203 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	AP3S2	P59780	193 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	MYL6	P60660	151 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	HIST1H3A	P68431	136 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	H3F3A	P84243	136 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	PSG4	Q00888	419 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	RELA	Q04206	551 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	SRSF6	Q13247	344 aa	Known RBP	0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR2F1	Q13607	317 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	GRK1	Q15835	563 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	TNFAIP8L3	Q5GJ75	292 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	FAM201A	Q5SY85	155 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	C9orf64	Q5T6V5	341 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	LPCAT3	Q6P1A2	487 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	LHFPL1	Q86WI0	220 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	MSRB3	Q8IXL7	192 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	C1orf174	Q8IYL3	243 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	LRRC25	Q8N386	305 aa	Predicted RBP	0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	CNEP1R1	Q8N9A8	125 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	ZNF565	Q8N9K5	539 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR1M1	Q8NGA1	313 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR5B17	Q8NGF7	314 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR4C16	Q8NGL9	310 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR5C1	Q8NGR4	320 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	OR11H2	Q8NH07	326 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	RNASE11	Q8TAA1	199 aa	Known RBP	0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	RPS4Y2	Q8TD47	263 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	LMX1A	Q8TE12	382 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	ITFG2	Q969R8	447 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	SLC35B4	Q969S0	331 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	GNPNAT1	Q96EK6	184 aa	Predicted RBP	0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	DOHH	Q9BU89	302 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	KIFC1	Q9BW19	673 aa		0.71	□□□□□ -2.3
CCNL1-223	ENST00000481173	CCDC90B	Q9GZT6	254 aa		0.71	□□□□□ -2.3

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