RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 C12orf4Q9NQ89 552 aa4.93□□□□□ -1.62
LRCH3-216ENST00000481048 HUWE1Q7Z6Z7 4374 aaKnown RBP4.93□□□□□ -1.62
LRCH3-216ENST00000481048 RYR3Q15413 4870 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 TRIM64CA6NLI5 447 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 FOXI3A8MTJ6 420 aaPredicted RBP4.92□□□□□ -1.62
LRCH3-216ENST00000481048 TRDCB7Z8K6 153 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 H0YIZ8 118 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 SLC17A2O00624 439 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 CASQ2O14958 399 aaPredicted RBP4.92□□□□□ -1.62
LRCH3-216ENST00000481048 SOCS1O15524 211 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 ARL6IP5O75915 188 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 CNIH1O95406 144 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 CA2P00918 260 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 IGHV3-11P01762 117 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 IGKV1-16P04430 117 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 SCTP09683 121 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 RRASP10301 218 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 PSMA1P25786 263 aaKnown RBP4.92□□□□□ -1.62
LRCH3-216ENST00000481048 TMEM50BP56557 158 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 CBX3Q13185 183 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 TPBGQ13641 420 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 P2RY14Q15391 338 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 FAM209BQ5JX69 171 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 PXDC1Q5TGL8 231 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 C5orf24Q7Z6I8 188 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 OR56B1Q8NGI3 324 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 OR4A4PQ8NGN8 299 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 OR9G4Q8NGQ1 327 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 OR2K2Q8NGT1 345 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 SETD6Q8TBK2 473 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 ISOC1Q96CN7 298 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 MS4A10Q96PG2 267 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 CLCC1Q96S66 551 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 CMSS1Q9BQ75 279 aaKnown RBP4.92□□□□□ -1.62
LRCH3-216ENST00000481048 NICN1Q9BSH3 213 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 FAM103A1Q9BTL3 118 aaKnown RBP4.92□□□□□ -1.62
LRCH3-216ENST00000481048 TMED9Q9BVK6 235 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 VCXQ9H320 206 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 ZNF355PQ9NSJ1 428 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 SCN3BQ9NY72 215 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 AK3Q9UIJ7 227 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 A3GALT2U3KPV4 340 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 DNAH7Q8WXX0 4024 aa4.92□□□□□ -1.62
LRCH3-216ENST00000481048 A0A0A6YYD4 124 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 LCE6AA0A183 80 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 SLC25A17O43808 307 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 AIREO43918 545 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 OR2A4O95047 310 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 IFNA6P05013 189 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 CRYGBP07316 175 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 GNAO1P09471 354 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 MALP21145 153 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 MRPS15P82914 257 aaKnown RBP4.91□□□□□ -1.62
LRCH3-216ENST00000481048 INSL4Q14641 139 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 SSX1Q16384 188 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 OGFRL1Q5TC84 451 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-216ENST00000481048 LCN12Q6JVE5 192 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 ZNF343Q6P1L6 599 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 GTSCR1Q86UQ5 136 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 LAX1Q8IWV1 398 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 Q8N402 240 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 ZNF383Q8NA42 475 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 TEX45Q8NA69 505 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 DRAXINQ8NBI3 349 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-216ENST00000481048 OR10J5Q8NHC4 309 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 CASTOR1Q8WTX7 329 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 UFD1Q92890 307 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 SNAPC3Q92966 411 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 ADTRPQ96IZ2 230 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 TINAGL1Q9GZM7 467 aaPredicted RBP4.91□□□□□ -1.62
LRCH3-216ENST00000481048 PARP12Q9H0J9 701 aaKnown RBP4.91□□□□□ -1.62
LRCH3-216ENST00000481048 EDA2RQ9HAV5 297 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 PLGRKTQ9HBL7 147 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 SLC35D1Q9NTN3 355 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 RDH8Q9NYR8 311 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 OR1A1Q9P1Q5 309 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 PEMTQ9UBM1 199 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 PEF1Q9UBV8 284 aaKnown RBP4.91□□□□□ -1.62
LRCH3-216ENST00000481048 RAB22AQ9UL26 194 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 LSM2Q9Y333 95 aaKnown RBP4.91□□□□□ -1.62
LRCH3-216ENST00000481048 TPRKBQ9Y3C4 175 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 V9GY05 133 aa4.91□□□□□ -1.62
LRCH3-216ENST00000481048 TRBV6-7A0A0A0MS04 114 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 IGKV1-6A0A0C4DH72 117 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 PTGES3LE9PB15 166 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 M0R1X1 148 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 FABP7O15540 132 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 DENRO43583 198 aaKnown RBP4.9□□□□□ -1.63
LRCH3-216ENST00000481048 CREBL2O60519 120 aaPredicted RBP4.9□□□□□ -1.63
LRCH3-216ENST00000481048 IGLV2-23P01705 113 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 CD3GP09693 182 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 GADD45AP24522 165 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 IRF3Q14653 427 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 ARL6IP1Q15041 203 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 RCN1Q15293 331 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 MED22Q15528 200 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 RAB11BQ15907 218 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 RTL8BQ17RB0 113 aa4.9□□□□□ -1.63
LRCH3-216ENST00000481048 RPEL1Q2QD12 228 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms