RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 LCN6P62502 163 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 LCN2P80188 198 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 PSG7Q13046 419 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 FLOT2Q14254 428 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 LY6G6FQ5SQ64 297 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 ACP7Q6ZNF0 438 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 ZNF101Q8IZC7 436 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 DEFB108BQ8NET1 73 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 OR10G2Q8NGC3 310 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 OR5L1Q8NGL2 311 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 OR8D4Q8NGM9 314 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 OR10G9Q8NGN4 311 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 OR4K13Q8NH42 304 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 KLF14Q8TD94 323 aaPredicted RBP3.58□□□□□ -1.84
UPF3A-205ENST00000479712 CANT1Q8WVQ1 401 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 APOBEC3DQ96AK3 386 aaPredicted RBP3.58□□□□□ -1.84
UPF3A-205ENST00000479712 CCDC124Q96CT7 223 aaKnown RBP3.58□□□□□ -1.84
UPF3A-205ENST00000479712 NMNAT3Q96T66 252 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 TSSK6Q9BXA6 273 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 OR51M1Q9H341 326 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 GEMIN7Q9H840 131 aaKnown RBP3.58□□□□□ -1.84
UPF3A-205ENST00000479712 ARMC1Q9NVT9 282 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 TAAR3PQ9P1P4 343 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 CYB5R1Q9UHQ9 305 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 ENOPH1Q9UHY7 261 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 POLR1DQ9Y2S0 133 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 NOP16Q9Y3C1 178 aaKnown RBP3.58□□□□□ -1.84
UPF3A-205ENST00000479712 LHFPL6Q9Y693 200 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 AGRNO00468 2067 aa3.58□□□□□ -1.84
UPF3A-205ENST00000479712 IGKV1D-13A0A0B4J2D9 117 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 IGHV1-69-2A0A0G2JMI3 117 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 IQCF6A8MYZ5 107 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 GNGT2O14610 69 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 CASQ2O14958 399 aaPredicted RBP3.57□□□□□ -1.84
UPF3A-205ENST00000479712 RER1O15258 196 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 SLC31A2O15432 143 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 CLIC3O95833 236 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 LHBP01229 141 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 IGHV1-46P01743 117 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 KRTAP1-4P0C5Y4 121 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 ACSM4P0C7M7 580 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 IGKV1-13P0DP09 117 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 CCL2P13500 99 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 ZNF823P16415 610 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 ZNF3P17036 446 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 SPI1P17947 270 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 ELK1P19419 428 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 RORCP51449 518 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 WNT4P56705 351 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 ESRRGP62508 458 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 ACTA2P62736 377 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 GRB2P62993 217 aaKnown RBP3.57□□□□□ -1.84
UPF3A-205ENST00000479712 ACTG2P63267 376 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 ACTC1P68032 377 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 ACTA1P68133 377 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 CDK5Q00535 292 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 SNCBQ16143 134 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 ZNF181Q2M3W8 571 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 AVPI1Q5T686 147 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 LINC01590Q5TEZ4 76 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 FAHD1Q6P587 224 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 DRAM2Q6UX65 266 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 BRD3OSQ6XYD6 125 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 LRP11Q86VZ4 500 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 C10orf67Q8IYJ2 551 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 FAM71E2Q8N5Q1 922 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 PROKR2Q8NFJ6 384 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 OR52E2Q8NGJ4 325 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 OR4A4PQ8NGN8 299 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 OR2G3Q8NGZ4 309 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 OR5K1Q8NHB7 308 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 SLC25A40Q8TBP6 338 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 TEX47Q8TBZ9 253 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 TSEN15Q8WW01 171 aaKnown RBP3.57□□□□□ -1.84
UPF3A-205ENST00000479712 RAB1CQ92928 201 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 SPTSSAQ969W0 71 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 SLC35E1Q96K37 410 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 PRRG3Q9BZD7 231 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 OR2J1Q9GZK6 312 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 SLC22A4Q9H015 551 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 GABARAPL1Q9H0R8 117 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 TPK1Q9H3S4 243 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 NCOR1P1Q9H4R4 102 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 C16orf95Q9H693 158 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 RPRD1BQ9NQG5 326 aaKnown RBP3.57□□□□□ -1.84
UPF3A-205ENST00000479712 MRPL22Q9NWU5 206 aaKnown RBP3.57□□□□□ -1.84
UPF3A-205ENST00000479712 MYEF2Q9P2K5 600 aaKnown RBP3.57□□□□□ -1.84
UPF3A-205ENST00000479712 COMMD3-BMI1R4GMX3 469 aa3.57□□□□□ -1.84
UPF3A-205ENST00000479712 PKD1P98161 4303 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 TRAV40A0A0B4J280 105 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 CLDN25C9JDP6 229 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 ZNF878C9JN71 531 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 H0YHG0 523 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 M0R135 149 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 XRCC2O43543 280 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 E2F6O75461 281 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 OR2F2O95006 317 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 CD28P10747 220 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 CCNOP22674 350 aa3.56□□□□□ -1.84
UPF3A-205ENST00000479712 CFL1P23528 166 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms