RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 HOXA4Q00056 320 aaPredicted RBP20.43■□□□□ 0.86
SYNGAP1-206ENST00000479510 EDDM3AQ14507 147 aa20.43■□□□□ 0.86
SYNGAP1-206ENST00000479510 PACRGQ96M98 296 aaPredicted RBP20.43■□□□□ 0.86
SYNGAP1-206ENST00000479510 HIST1H2BLQ99880 126 aa20.43■□□□□ 0.86
SYNGAP1-206ENST00000479510 MUC3AQ02505 3323 aa20.43■□□□□ 0.86
SYNGAP1-206ENST00000479510 GTF3C1Q12789 2109 aa20.43■□□□□ 0.86
SYNGAP1-206ENST00000479510 CGAP01215 116 aa20.42■□□□□ 0.86
SYNGAP1-206ENST00000479510 VDAC2P45880 294 aaPredicted RBP20.42■□□□□ 0.86
SYNGAP1-206ENST00000479510 DCTN5Q9BTE1 182 aa20.42■□□□□ 0.86
SYNGAP1-206ENST00000479510 TNFSF13O75888 250 aa20.42■□□□□ 0.86
SYNGAP1-206ENST00000479510 LCN2P80188 198 aa20.42■□□□□ 0.86
SYNGAP1-206ENST00000479510 SPINK9Q5DT21 86 aa20.42■□□□□ 0.86
SYNGAP1-206ENST00000479510 KCNIP4Q6PIL6 250 aa20.42■□□□□ 0.86
SYNGAP1-206ENST00000479510 OR2Z1Q8NG97 314 aa20.42■□□□□ 0.86
SYNGAP1-206ENST00000479510 S100PBPQ96BU1 408 aa20.42■□□□□ 0.86
SYNGAP1-206ENST00000479510 IMMP2LQ96T52 175 aa20.42■□□□□ 0.86
SYNGAP1-206ENST00000479510 PRDM13Q9H4Q3 707 aa20.42■□□□□ 0.86
SYNGAP1-206ENST00000479510 FREM2Q5SZK8 3169 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 PTPRBP23467 1997 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 M0R1X1 148 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 EGR1P18146 543 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 LINC00205P59089 165 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 TLE1Q04724 770 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 PDZD11Q5EBL8 140 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 CISD2Q8N5K1 135 aaKnown RBP20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 OR2T10Q8NGZ9 312 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 OR5R1Q8NH85 324 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 TMEM170AQ8WVE7 144 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 SLC25A15Q9Y619 301 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 CACNA1GO43497 2377 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 TRGV8A0A0C4DH27 118 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 A0A1W2PPV4 95 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 IFNA10P01566 189 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 RAB7AP51149 207 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 LOXL3P58215 753 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 RPS16P62249 146 aaKnown RBP20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 STARD4Q96DR4 205 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 S1PR3Q99500 378 aa20.41■□□□□ 0.86
SYNGAP1-206ENST00000479510 PRSS46E5RG02 174 aa20.4■□□□□ 0.86
SYNGAP1-206ENST00000479510 DVL1O14640 695 aa20.4■□□□□ 0.86
SYNGAP1-206ENST00000479510 C3orf36Q3SXR2 165 aa20.4■□□□□ 0.86
SYNGAP1-206ENST00000479510 ZNF436-AS1Q8NC38 126 aaPredicted RBP20.4■□□□□ 0.86
SYNGAP1-206ENST00000479510 OR1P1Q8NH06 330 aa20.4■□□□□ 0.86
SYNGAP1-206ENST00000479510 CHODLQ9H9P2 273 aa20.4■□□□□ 0.86
SYNGAP1-206ENST00000479510 HEYLQ9NQ87 328 aaPredicted RBP20.4■□□□□ 0.86
SYNGAP1-206ENST00000479510 PDLIM4P50479 330 aa20.39■□□□□ 0.86
SYNGAP1-206ENST00000479510 RELBQ01201 579 aa20.39■□□□□ 0.86
SYNGAP1-206ENST00000479510 IFI27L2Q9H2X8 130 aa20.39■□□□□ 0.86
SYNGAP1-206ENST00000479510 GALR2O43603 387 aaPredicted RBP20.39■□□□□ 0.85
SYNGAP1-206ENST00000479510 IGHV3-13P01766 116 aa20.39■□□□□ 0.85
SYNGAP1-206ENST00000479510 ACTL10Q5JWF8 245 aa20.39■□□□□ 0.85
SYNGAP1-206ENST00000479510 TREML4Q6UXN2 200 aa20.39■□□□□ 0.85
SYNGAP1-206ENST00000479510 PIP4P1Q86T03 277 aa20.39■□□□□ 0.85
SYNGAP1-206ENST00000479510 NECAP1Q8NC96 275 aa20.39■□□□□ 0.85
SYNGAP1-206ENST00000479510 DUSP13Q9UII6 198 aa20.39■□□□□ 0.85
SYNGAP1-206ENST00000479510 GFRA3O60609 400 aa20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 NPPCP23582 126 aa20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 GCSAMQ8N6F7 178 aa20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 OR4S2Q8NH73 311 aa20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 Q8TCH9 128 aa20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 DDB2Q92466 427 aa20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 PCGF1Q9BSM1 259 aa20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 DMDP11532 3685 aa20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 LTC4SQ16873 150 aa20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 LINC01551Q86U37 167 aa20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 OPN3Q9H1Y3 402 aaPredicted RBP20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 DKK4Q9UBT3 224 aa20.38■□□□□ 0.85
SYNGAP1-206ENST00000479510 MBD3L4A6NDZ8 208 aaPredicted RBP20.37■□□□□ 0.85
SYNGAP1-206ENST00000479510 MBD3L3A6NE82 208 aaPredicted RBP20.37■□□□□ 0.85
SYNGAP1-206ENST00000479510 MBD3L5A6NJ08 208 aaPredicted RBP20.37■□□□□ 0.85
SYNGAP1-206ENST00000479510 PKIAP61925 76 aa20.37■□□□□ 0.85
SYNGAP1-206ENST00000479510 CDPF1Q6NVV7 123 aa20.37■□□□□ 0.85
SYNGAP1-206ENST00000479510 MBD3L2Q8NHZ7 208 aaPredicted RBP20.37■□□□□ 0.85
SYNGAP1-206ENST00000479510 ELOVL1Q9BW60 279 aa20.37■□□□□ 0.85
SYNGAP1-206ENST00000479510 TRBV23-1A0A0A0MS06 115 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 A0A1W2PPQ1 181 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 CXorf1O96002 111 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 STAG3L2P0CL84 134 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 STAG3L3P0CL85 134 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 CGB3P0DN86 165 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 CGB7P0DN87 165 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 PLA2G5P39877 138 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 EDDM3BP56851 147 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 GNB1P62873 340 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 RTP5Q14D33 572 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 TMEM140Q9NV12 185 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 LHBP01229 141 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 JOSD1Q15040 202 aaPredicted RBP20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 GGTLC1Q9BX51 225 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 CALYQ9NYX4 217 aa20.36■□□□□ 0.85
SYNGAP1-206ENST00000479510 TRAV38-1A0A0B4J264 116 aa20.35■□□□□ 0.85
SYNGAP1-206ENST00000479510 XKRY2A2RUG3 117 aa20.35■□□□□ 0.85
SYNGAP1-206ENST00000479510 RRHO14718 337 aa20.35■□□□□ 0.85
SYNGAP1-206ENST00000479510 DEFA6Q01524 100 aa20.35■□□□□ 0.85
SYNGAP1-206ENST00000479510 MEGF10Q96KG7 1140 aa20.35■□□□□ 0.85
SYNGAP1-206ENST00000479510 MGST2Q99735 147 aa20.35■□□□□ 0.85
SYNGAP1-206ENST00000479510 TMEM204Q9BSN7 226 aa20.35■□□□□ 0.85
SYNGAP1-206ENST00000479510 ASCL3Q9NQ33 180 aa20.35■□□□□ 0.85
SYNGAP1-206ENST00000479510 TCF19Q9Y242 345 aa20.35■□□□□ 0.85
SYNGAP1-206ENST00000479510 LSM4Q9Y4Z0 139 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms