RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 SSC4DQ8WTU2 575 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 ARPC1AQ92747 370 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 FAM19A4Q96LR4 140 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 PITX2Q99697 317 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 TM2D1Q9BX74 207 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 SEC11CQ9BY50 192 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 GNB4Q9HAV0 340 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 VAX2Q9UIW0 290 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 POMPQ9Y244 141 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 PKIGQ9Y2B9 76 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 MED31Q9Y3C7 131 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 MRPS16Q9Y3D3 137 aaKnown RBP2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 FLVCR1Q9Y5Y0 555 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 ZSWIM8A7E2V4 1837 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 ECM29Q5VYK3 1845 aa2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 ZNF106Q9H2Y7 1883 aaKnown RBP2.81□□□□□ -1.96
FNDC3B-209ENST00000478016 SIPA1L1O43166 1804 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 IGKV2D-30A0A075B6S6 120 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 TRAV26-2A0A0B4J265 109 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 IGHV1-69-2A0A0G2JMI3 117 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 LINC01553A4QN01 128 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 MEIS3P1A6NDR6 274 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 OR51F1A6NGY5 319 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 B4DEV8 164 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 K7EPK0 472 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 NPFFO15130 113 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 IGKV1D-16P01601 117 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 IGHG1P01857 330 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 LINC00694P0DN24 101 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 ERGP11308 486 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 CXCL2P19875 107 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 CXCL3P19876 107 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 PSMB9P28065 219 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 APOC4P55056 127 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 DIO3P55073 304 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 DEFA5Q01523 94 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 SRSF9Q13242 221 aaKnown RBP eCLIP2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 LRRC37A5PQ49AS3 106 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 PHLDA2Q53GA4 152 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 ZNF506Q5JVG8 444 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 FAM120AOSQ5T036 256 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 NXNL2Q5VZ03 156 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 OLFML2AQ68BL7 652 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 TRNP1Q6NT89 227 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 CNIH2Q6PI25 160 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 ZNF773Q6PK81 442 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 RASL11AQ6T310 242 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 TCF23Q7RTU1 214 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 MRPL55Q7Z7F7 128 aaKnown RBP2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 EXOC3-AS1Q8N2X6 119 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 RNF175Q8N4F7 328 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 FAM71E2Q8N5Q1 922 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 KLHDC1Q8N7A1 406 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 STPG4Q8N801 248 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 ZNF441Q8N8Z8 693 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 SUMF2Q8NBJ7 301 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 OR51A4Q8NGJ6 313 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 OR2A1Q8NGT9 310 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 PPTC7Q8NI37 304 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 CT55Q8WUE5 264 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 C15orf40Q8WUR7 153 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 DNAJA3Q96EY1 480 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 DYNLL2Q96FJ2 89 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 LINC01587Q99440 93 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 SDF2Q99470 211 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 SPIN2AQ99865 258 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 SPIN2BQ9BPZ2 258 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 DERL1Q9BUN8 251 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 GGTLC1Q9BX51 225 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 C1QTNF6Q9BXI9 259 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 ULBP3Q9BZM4 244 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 WDR61Q9GZS3 305 aaKnown RBP2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 POLR2J3Q9H1A7 115 aaKnown RBP2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 OR51E2Q9H255 320 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 RERGLQ9H628 205 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 JPT2Q9H910 190 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 PDFQ9HBH1 243 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 DNAJC27Q9NZQ0 273 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 LAMTOR3Q9UHA4 124 aa2.8□□□□□ -1.96
FNDC3B-209ENST00000478016 LAMB1P07942 1786 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 COL1A1P02452 1464 aaPredicted RBP2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 IGLV3-22A0A075B6J6 115 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 IGHV4-28A0A0C4DH34 117 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 LOC101059948A0A1B0GTJ6 334 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 CD300LBA8K4G0 201 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 EPM2AB3EWF7 344 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 LINC01619G3V211 115 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 FGF17O60258 216 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 EPPINO95925 133 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 IGKV5-2P06315 115 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 CD14P08571 375 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 PGA4P0DJD7 388 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 PGA3P0DJD8 388 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 PGA5P0DJD9 388 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 PFN2P35080 140 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 GPM6AP51674 278 aa2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 ZNF140P52738 457 aaPredicted RBP2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 SUB1P53999 127 aaKnown RBP eCLIP2.79□□□□□ -1.96
FNDC3B-209ENST00000478016 AQP4P55087 323 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms