RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 FAM27E3Q08E93 113 aa12.31□□□□□ -0.44
HDAC6-220ENST00000477528 OR2T6Q8NHC8 308 aa12.31□□□□□ -0.44
HDAC6-220ENST00000477528 DCTN5Q9BTE1 182 aa12.31□□□□□ -0.44
HDAC6-220ENST00000477528 TRBV6-6A0A0A6YYG2 114 aa12.31□□□□□ -0.44
HDAC6-220ENST00000477528 SRP14P37108 136 aaKnown RBP12.31□□□□□ -0.44
HDAC6-220ENST00000477528 LINC00518Q8N0U6 118 aa12.31□□□□□ -0.44
HDAC6-220ENST00000477528 BSCL2Q96G97 398 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-220ENST00000477528 MUC22E2RYF6 1773 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-220ENST00000477528 KIAA1324LA8MWY0 1029 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-220ENST00000477528 CDX4O14627 284 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-220ENST00000477528 CD40P25942 277 aa12.31□□□□□ -0.44
HDAC6-220ENST00000477528 PAX5Q02548 391 aa12.31□□□□□ -0.44
HDAC6-220ENST00000477528 RSPO1Q2MKA7 263 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-220ENST00000477528 NPCDR1Q9BY65 106 aa12.31□□□□□ -0.44
HDAC6-220ENST00000477528 KBTBD11O94819 623 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 CD5P06127 495 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 LYZP61626 148 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 GNB2P62879 340 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-220ENST00000477528 TXN2Q99757 166 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 NDFIP1Q9BT67 221 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 PPP1R14DQ9NXH3 145 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 CLCF1Q9UBD9 225 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 WASHC3Q9Y3C0 194 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 TGIF2-C20orf24A0A0A6YYL0 155 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 CCL21O00585 134 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 Q56UQ5 140 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 CLDND2Q8NHS1 167 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 PERPQ96FX8 193 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 MS4A10Q96PG2 267 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 AAMDCQ9H7C9 122 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 THYN1Q9P016 225 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 TRAV20A0A0B4J274 112 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 FAM57AQ8TBR7 257 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 HSBP1O75506 76 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 IGLV3-1P01715 115 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 CCKARP32238 428 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 FAM216AQ8WUB2 273 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 MIOXQ9UGB7 285 aa12.3□□□□□ -0.44
HDAC6-220ENST00000477528 ARL3P36405 182 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 KRTDAPP60985 99 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 NMSQ5H8A3 153 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 SGMS2Q8NHU3 365 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 GGACTQ9BVM4 153 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 WIPF3A6NGB9 483 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 DLL1O00548 723 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 CRISP2P16562 243 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 PARLQ9H300 379 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 TUBA4BQ9H853 241 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 COA4Q9NYJ1 87 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 IGHV1-18A0A0C4DH31 117 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 ATP5IP56385 69 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-220ENST00000477528 HIF1ANQ9NWT6 349 aa12.29□□□□□ -0.44
HDAC6-220ENST00000477528 KBTBD11-OT1A0A1B0GTJ5 212 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 TM4SF5O14894 197 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 USF1P22415 310 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-220ENST00000477528 PAX6P26367 422 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 PCSK4Q6UW60 755 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 PQLC2Q6ZP29 291 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 DKK1O94907 266 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 RANP62826 216 aaKnown RBP12.28□□□□□ -0.44
HDAC6-220ENST00000477528 ZNF596Q8TC21 504 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 ASCL3Q9NQ33 180 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 DENND4AQ7Z401 1863 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 LILRA1O75019 489 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 KIR2DL2P43627 348 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-220ENST00000477528 RPL27AP46776 148 aaKnown RBP12.28□□□□□ -0.44
HDAC6-220ENST00000477528 SELENOTP62341 195 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 PLSCR4Q9NRQ2 329 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 ARL14EPLP0DKL9 152 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 MDKP21741 143 aaPredicted RBP12.28□□□□□ -0.44
HDAC6-220ENST00000477528 SSTP61278 116 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 SUMO1P63165 101 aaKnown RBP12.28□□□□□ -0.44
HDAC6-220ENST00000477528 FAM201AQ5SY85 155 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 GLRX5Q86SX6 157 aa12.28□□□□□ -0.44
HDAC6-220ENST00000477528 YPEL1O60688 119 aa12.27□□□□□ -0.44
HDAC6-220ENST00000477528 TOX4O94842 621 aa12.27□□□□□ -0.44
HDAC6-220ENST00000477528 TMEM186Q96B77 213 aa12.27□□□□□ -0.44
HDAC6-220ENST00000477528 YPEL2Q96QA6 119 aa12.27□□□□□ -0.44
HDAC6-220ENST00000477528 PMCHP20382 165 aa12.27□□□□□ -0.44
HDAC6-220ENST00000477528 CD81P60033 236 aa12.27□□□□□ -0.44
HDAC6-220ENST00000477528 FOXF2Q12947 444 aa12.27□□□□□ -0.44
HDAC6-220ENST00000477528 TCL1AP56279 114 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 TOMM20LQ6UXN7 152 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 MMD2Q8IY49 270 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 OR4C13Q8NGP0 309 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 OR1L6Q8NGR2 347 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 PAXXQ9BUH6 204 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 ALPK3Q96L96 1907 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 A0A087WWC5 75 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 RAMP3O60896 148 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 DOLPP1Q86YN1 238 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 OR9G1Q8NH87 305 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 RASL11BQ9BPW5 248 aa12.27□□□□□ -0.45
HDAC6-220ENST00000477528 LINC00869P0C866 280 aa12.26□□□□□ -0.45
HDAC6-220ENST00000477528 ERVFRD-1P60508 538 aa12.26□□□□□ -0.45
HDAC6-220ENST00000477528 TFF3Q07654 80 aa12.26□□□□□ -0.45
HDAC6-220ENST00000477528 PCGF1Q9BSM1 259 aa12.26□□□□□ -0.45
HDAC6-220ENST00000477528 NUBP1P53384 320 aa12.26□□□□□ -0.45
HDAC6-220ENST00000477528 ICAM4Q14773 271 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms