RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 EHFQ9NZC4 300 aa12.57□□□□□ -0.4
COL1A1-205ENST00000476387 SRRM4A7MD48 611 aaKnown RBP12.56□□□□□ -0.4
COL1A1-205ENST00000476387 IGLV2-14P01704 120 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 OR8U8P0C7N1 319 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 TPPP2P59282 170 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 TAS2R46P59540 309 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 RPL30P62888 115 aaKnown RBP12.56□□□□□ -0.4
COL1A1-205ENST00000476387 ZNF616Q08AN1 781 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 KIAA0141Q14154 515 aaPredicted RBP12.56□□□□□ -0.4
COL1A1-205ENST00000476387 MSMO1Q15800 293 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 ZNF66Q6ZN08 573 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 IDO2Q6ZQW0 420 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 PHB2Q99623 299 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 SLC5A7Q9GZV3 580 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 SLA2Q9H6Q3 261 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 ZNF355PQ9NSJ1 428 aa12.56□□□□□ -0.4
COL1A1-205ENST00000476387 NBEAL2Q6ZNJ1 2754 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 SEC14L6B5MCN3 397 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 I3L521 148 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 ACTL6BO94805 426 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 TRGV3P03979 118 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 SAA1P0DJI8 122 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-205ENST00000476387 KIR2DS2P43631 304 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 SSBP2P81877 361 aaPredicted RBP12.55□□□□□ -0.4
COL1A1-205ENST00000476387 TNXAQ16473 311 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 CTF1Q16619 201 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 PRSS8Q16651 343 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 TMEM17Q86X19 198 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 MFSD4AQ8N468 514 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 POC5Q8NA72 575 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 ZBTB34Q8NCN2 500 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 OR1N2Q8NGR9 330 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 OR5H2Q8NGV7 314 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 BORCS5Q969J3 196 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 TMEM68Q96MH6 324 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 MS4A10Q96PG2 267 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 CCL28Q9NRJ3 127 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 ANAPC10Q9UM13 185 aa12.55□□□□□ -0.4
COL1A1-205ENST00000476387 FAM25AB3EWG3 89 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 FAM25CB3EWG5 89 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 FAM25GB3EWG6 89 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 H3BUA1 57 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 MPPED1O15442 326 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 TNFSF12O43508 249 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 HPGDSO60760 199 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 LGALS1P09382 135 aaKnown RBP12.54□□□□□ -0.4
COL1A1-205ENST00000476387 INSL3P51460 131 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 CATR1Q13166 79 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 EIF4EBP1Q13541 118 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-205ENST00000476387 SNX29P2Q8IUI4 249 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 VSTM2AQ8TAG5 236 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 GIMAP1Q8WWP7 306 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 SCOCQ9UIL1 159 aa12.54□□□□□ -0.4
COL1A1-205ENST00000476387 LSM4Q9Y4Z0 139 aaKnown RBP12.54□□□□□ -0.4
COL1A1-205ENST00000476387 DNAH9Q9NYC9 4486 aa12.53□□□□□ -0.4
COL1A1-205ENST00000476387 PMP2P02689 132 aa12.53□□□□□ -0.4
COL1A1-205ENST00000476387 NHLRC4P0CG21 123 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-205ENST00000476387 ZNF182P17025 639 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-205ENST00000476387 NAT1P18440 290 aa12.53□□□□□ -0.4
COL1A1-205ENST00000476387 ELK1P19419 428 aa12.53□□□□□ -0.4
COL1A1-205ENST00000476387 ALDH3B2P48448 385 aa12.53□□□□□ -0.4
COL1A1-205ENST00000476387 MMD2Q8IY49 270 aa12.53□□□□□ -0.4
COL1A1-205ENST00000476387 OR5T1Q8NG75 326 aa12.53□□□□□ -0.4
COL1A1-205ENST00000476387 SRSF12Q8WXF0 261 aaKnown RBP12.53□□□□□ -0.4
COL1A1-205ENST00000476387 GPHA2Q96T91 129 aa12.53□□□□□ -0.4
COL1A1-205ENST00000476387 ZNF430Q9H8G1 570 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-205ENST00000476387 LINC01619G3V211 115 aa12.52□□□□□ -0.41
COL1A1-205ENST00000476387 HRASP01112 189 aa12.52□□□□□ -0.41
COL1A1-205ENST00000476387 IGHV3-11P01762 117 aa12.52□□□□□ -0.41
COL1A1-205ENST00000476387 ECI1P42126 302 aa12.52□□□□□ -0.41
COL1A1-205ENST00000476387 RFX2P48378 723 aa12.52□□□□□ -0.41
COL1A1-205ENST00000476387 DYRK1AQ13627 763 aa12.52□□□□□ -0.41
COL1A1-205ENST00000476387 GPX8Q8TED1 209 aa12.52□□□□□ -0.41
COL1A1-205ENST00000476387 WWC2-AS2Q96NR7 200 aa12.52□□□□□ -0.41
COL1A1-205ENST00000476387 ZNF2Q9BSG1 426 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-205ENST00000476387 ALX4Q9H161 411 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-205ENST00000476387 COA4Q9NYJ1 87 aa12.52□□□□□ -0.41
COL1A1-205ENST00000476387 SORL1Q92673 2214 aa12.52□□□□□ -0.41
COL1A1-205ENST00000476387 A0A0G2JLM5 398 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 C13orf42A0A1B0GVH6 325 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 MSGN1A6NI15 193 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 KBTBD11O94819 623 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 OR2A4O95047 310 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 APELAP0DMC3 54 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 HLA-DMAP28067 261 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 RCVRNP35243 200 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 HRH1P35367 487 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 MRGPRG-AS1Q2M3A8 158 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 ASPHD1Q5U4P2 390 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 AADACL3Q5VUY0 350 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 ZNF818PQ6ZRF7 136 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 CLVS1Q8IUQ0 354 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-205ENST00000476387 VKORC1L1Q8N0U8 176 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 SPAG16Q8N0X2 631 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 OR51H1Q8NH63 302 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 MOB3AQ96BX8 217 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 RHOVQ96L33 236 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 OR2A7Q96R45 310 aa12.51□□□□□ -0.41
COL1A1-205ENST00000476387 PRR25Q96S07 402 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms