RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 C5orf51A6NDU8 294 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 KIR2DS2P43631 304 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 GNG10P50151 68 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 DYNLT3P51808 116 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 FGL1Q08830 312 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 SP6Q3SY56 376 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 ZFP69Q49AA0 526 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 FAM71F2Q6NXP2 309 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 LYG1Q8N1E2 194 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 OR10X1Q8NGY0 326 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 ZNF596Q8TC21 504 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 TCTEX1D2Q8WW35 142 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 TMEM56Q96MV1 263 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 RANBP3Q9H6Z4 567 aaPredicted RBP12.54□□□□□ -0.4
CPSF3-203ENST00000475482 TMED3Q9Y3Q3 217 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 TMEM56-RWDD3S4R434 201 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 NOTCH1P46531 2555 aa12.54□□□□□ -0.4
CPSF3-203ENST00000475482 FAM25EA8MYX2 175 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 J3QR06 171 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 CHST1O43916 411 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 SNAPC5O75971 98 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 CDS2O95674 445 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 ARG1P05089 322 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 THBS3P49746 956 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 ZNF134P52741 427 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 TAGLNQ01995 201 aaKnown RBP12.53□□□□□ -0.4
CPSF3-203ENST00000475482 TMEM268Q5VZI3 342 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 FAM53AQ6NSI3 398 aaPredicted RBP12.53□□□□□ -0.4
CPSF3-203ENST00000475482 ABHD12Q8N2K0 398 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 RBPMSQ93062 196 aaKnown RBP12.53□□□□□ -0.4
CPSF3-203ENST00000475482 LEAP2Q969E1 77 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 FYTTD1Q96QD9 318 aaKnown RBP12.53□□□□□ -0.4
CPSF3-203ENST00000475482 SPIN2AQ99865 258 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 SPIN2BQ9BPZ2 258 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 CLEC7AQ9BXN2 247 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 COMMD9Q9P000 198 aa12.53□□□□□ -0.4
CPSF3-203ENST00000475482 AMMECR1Q9Y4X0 333 aaPredicted RBP12.53□□□□□ -0.4
CPSF3-203ENST00000475482 IGHV2-26A0A0B4J1V2 119 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 C13orf42A0A1B0GVH6 325 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 M0R1X1 148 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 TIMM23O14925 209 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 IGHV3-7P01780 117 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 C1QBP02746 253 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 EIF4EBP1Q13541 118 aaPredicted RBP12.52□□□□□ -0.41
CPSF3-203ENST00000475482 LY6EQ16553 131 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 MINOS1Q5TGZ0 78 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 OR2T35Q8NGX2 323 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 C2orf50Q96LR7 162 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 NMES1Q9C002 83 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 TCF19Q9Y242 345 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 MINOS1-NBL1R4GNA1 71 aa12.52□□□□□ -0.41
CPSF3-203ENST00000475482 SAA2-SAA4A0A096LPE2 208 aa12.51□□□□□ -0.41
CPSF3-203ENST00000475482 A6NDX4 124 aa12.51□□□□□ -0.41
CPSF3-203ENST00000475482 SLC31A2O15432 143 aa12.51□□□□□ -0.41
CPSF3-203ENST00000475482 RBFOX2O43251 390 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPSF3-203ENST00000475482 HOXB5P09067 269 aa12.51□□□□□ -0.41
CPSF3-203ENST00000475482 SAA2P0DJI9 122 aaPredicted RBP12.51□□□□□ -0.41
CPSF3-203ENST00000475482 VDAC1P21796 283 aa12.51□□□□□ -0.41
CPSF3-203ENST00000475482 DUTP33316 252 aaKnown RBP12.51□□□□□ -0.41
CPSF3-203ENST00000475482 H2BFSP57053 126 aa12.51□□□□□ -0.41
CPSF3-203ENST00000475482 SSX2Q16385 188 aa12.51□□□□□ -0.41
CPSF3-203ENST00000475482 Q8N2B8 174 aa12.51□□□□□ -0.41
CPSF3-203ENST00000475482 HYLS1Q96M11 299 aa12.51□□□□□ -0.41
CPSF3-203ENST00000475482 ZFP57Q9NU63 452 aa12.51□□□□□ -0.41
CPSF3-203ENST00000475482 TET2Q6N021 2002 aaPredicted RBP12.5□□□□□ -0.41
CPSF3-203ENST00000475482 A0A1W2PPE3 182 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 CCSO14618 274 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 ADAP1O75689 374 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 SIX6O95475 246 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 IGLV1-47P01700 117 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 PET100P0DJ07 73 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 RRASP10301 218 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 EIF2B2P49770 351 aaKnown RBP12.5□□□□□ -0.41
CPSF3-203ENST00000475482 RAB13P51153 203 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 CD300CQ08708 224 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 C2orf68Q2NKX9 166 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 GGNBP1Q5YKI7 109 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 THOC7Q6I9Y2 204 aaKnown RBP12.5□□□□□ -0.41
CPSF3-203ENST00000475482 SELENOHQ8IZQ5 122 aaKnown RBP12.5□□□□□ -0.41
CPSF3-203ENST00000475482 SPAG16Q8N0X2 631 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 SLC35G3Q8N808 338 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 OR4P4Q8NGL7 312 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 RNASE11Q8TAA1 199 aaKnown RBP12.5□□□□□ -0.41
CPSF3-203ENST00000475482 RRNAD1Q96FB5 475 aaKnown RBP12.5□□□□□ -0.41
CPSF3-203ENST00000475482 PRR13Q9NZ81 148 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 SIGLEC9Q9Y336 463 aa12.5□□□□□ -0.41
CPSF3-203ENST00000475482 BOLA2-SMG1P6H3BVE0 249 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 M0QZ24 198 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 TXNL1O43396 289 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 WIPF1O43516 503 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 CEACAM3P40198 252 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 ZNF137PP52743 207 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 RTL8BQ17RB0 113 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 IAH1Q2TAA2 248 aaPredicted RBP12.49□□□□□ -0.41
CPSF3-203ENST00000475482 HLA-DRB5Q30154 266 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 RPL39P5Q59GN2 51 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 ZNF833PQ6ZTB9 187 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 LYZL2Q7Z4W2 148 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 NOXA1Q86UR1 476 aa12.49□□□□□ -0.41
CPSF3-203ENST00000475482 FAM219AQ8IW50 185 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms