RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 TICRRQ7Z2Z1 1910 aa2.59□□□□□ -1.99
TM9SF3-204ENST00000475401 CHD5Q8TDI0 1954 aa2.59□□□□□ -2
TM9SF3-204ENST00000475401 ADAMTSL1Q8N6G6 1762 aa2.59□□□□□ -2
TM9SF3-204ENST00000475401 BAZ1BQ9UIG0 1483 aaKnown RBP2.58□□□□□ -2
TM9SF3-204ENST00000475401 DICER1Q9UPY3 1922 aaKnown RBP2.58□□□□□ -2
TM9SF3-204ENST00000475401 TRIP11Q15643 1979 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 FAM236DA0A1B0GTK5 79 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 LINC00862A6NCI5 91 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 IGKV1D-33P01593 117 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 IGKV1-33P01594 117 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 TRGV3P03979 118 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 GYPCP04921 128 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 FAM236CP0DP71 79 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 SNRPD2P62316 118 aaKnown RBP2.58□□□□□ -2
TM9SF3-204ENST00000475401 C9orf64Q5T6V5 341 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 OR11G2Q8NGC1 345 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 SGMS2Q8NHU3 365 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 CMSS1Q9BQ75 279 aaKnown RBP2.58□□□□□ -2
TM9SF3-204ENST00000475401 KIFC1Q9BW19 673 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 NKX6-2Q9C056 277 aaPredicted RBP2.58□□□□□ -2
TM9SF3-204ENST00000475401 TRABDQ9H4I3 376 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 CMTM6Q9NX76 183 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 KLK5Q9Y337 293 aaPredicted RBP2.58□□□□□ -2
TM9SF3-204ENST00000475401 NUP205Q92621 2012 aa2.58□□□□□ -2
TM9SF3-204ENST00000475401 TRAV26-2A0A0B4J265 109 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 LOC105371267A0A1B0GV96 52 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 EXOC1LA0A1B0GW35 172 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 hADV38S2A0JD32 116 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 ZNF729A6NN14 1252 aaPredicted RBP2.57□□□□□ -2
TM9SF3-204ENST00000475401 GSTZ1O43708 216 aaPredicted RBP2.57□□□□□ -2
TM9SF3-204ENST00000475401 PDE6DO43924 150 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 HLA-DQB2P05538 268 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 IGHV3-30-3P0DP02 117 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 RPL5P46777 297 aaKnown RBP2.57□□□□□ -2
TM9SF3-204ENST00000475401 DEFA6Q01524 100 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 OR8G1Q15617 311 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 OOSP2Q86WS3 158 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 SLC35F6Q8N357 371 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 OR8B12Q8NGG6 310 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 OR51A2Q8NGJ7 313 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 MCFD2Q8NI22 146 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 TEX47Q8TBZ9 253 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 CD200R1Q8TD46 325 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 CNBD2Q96M20 576 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 TSPAN32Q96QS1 320 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 GABARAPL1Q9H0R8 117 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 RNASE7Q9H1E1 156 aaKnown RBP2.57□□□□□ -2
TM9SF3-204ENST00000475401 NUP155O75694 1391 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 DSCAML1Q8TD84 2053 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 HECW2Q9P2P5 1572 aa2.57□□□□□ -2
TM9SF3-204ENST00000475401 COL5A1P20908 1838 aaPredicted RBP2.56□□□□□ -2
TM9SF3-204ENST00000475401 KNCNA6PVL3 124 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 A8MUN3 132 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 H3BMM0 161 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 LST1O00453 97 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 LECT2O14960 151 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 IFNA1P01562 189 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 C1QBP02746 253 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 GUSBP08236 651 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 INAFM2P0DMQ5 153 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 GABRA4P48169 554 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 ZNF140P52738 457 aaPredicted RBP2.56□□□□□ -2
TM9SF3-204ENST00000475401 HSPE1P61604 102 aaKnown RBP2.56□□□□□ -2
TM9SF3-204ENST00000475401 FKBP1AP62942 108 aaKnown RBP2.56□□□□□ -2
TM9SF3-204ENST00000475401 CAV1Q03135 178 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 FABP9Q0Z7S8 132 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 ALX1Q15699 326 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 TNFAIP8L3Q5GJ75 292 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 C10orf91Q5T1B1 145 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 TRIQKQ629K1 86 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 SMIM15Q7Z3B0 74 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 GPHB5Q86YW7 130 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 BAP18Q8IXM2 172 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 SLC22A24Q8N4F4 322 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.56□□□□□ -2
TM9SF3-204ENST00000475401 CMTM2Q8TAZ6 248 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 UBE2WQ96B02 151 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 DDA1Q9BW61 102 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 ULBP3Q9BZM4 244 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 C14orf105Q9NVL8 296 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 AK3Q9UIJ7 227 aa2.56□□□□□ -2
TM9SF3-204ENST00000475401 FAM32AQ9Y421 112 aaKnown RBP2.56□□□□□ -2
TM9SF3-204ENST00000475401 TRBV24-1A0A075B6N3 115 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 HLA-DRB1P01911 266 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 LGALS3P17931 250 aaKnown RBP2.55□□□□□ -2
TM9SF3-204ENST00000475401 TNFRSF9Q07011 255 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 APOFQ13790 326 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 MOGQ16653 247 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 MRPL51Q4U2R6 128 aaKnown RBP2.55□□□□□ -2
TM9SF3-204ENST00000475401 SMARCD3Q6STE5 483 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 C12orf45Q8N5I9 185 aaPredicted RBP2.55□□□□□ -2
TM9SF3-204ENST00000475401 KLK6Q92876 244 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 RNASE6Q93091 150 aaKnown RBP2.55□□□□□ -2
TM9SF3-204ENST00000475401 ROBO3Q96MS0 1386 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 UPK3BQ9BT76 320 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 PCBD2Q9H0N5 130 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 DUSP21Q9H596 190 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 C11orf1Q9H5F2 150 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 PARVBQ9HBI1 364 aa2.55□□□□□ -2
TM9SF3-204ENST00000475401 OTOFQ9HC10 1997 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms