RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 ISG20L2Q9H9L3 353 aaKnown RBP9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 TNFRSF19Q9NS68 423 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 ZNRD1Q9P1U0 126 aa9.4□□□□□ -0.91
HLA-DOB-208ENST00000475235 MEIKINA0A087WXM9 373 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 HPRT1P00492 218 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 IGHV4-59P01825 116 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 S100A7P31151 101 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 SAA4P35542 130 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 ID1P41134 155 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 RANP62826 216 aaKnown RBP9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 COL10A1Q03692 680 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 HMGN3Q15651 99 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 MORN2Q502X0 79 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 MIDNQ504T8 468 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 GCSAMLQ5JQS6 135 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 C6orf141Q5SZD1 244 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 TMEM200BQ69YZ2 307 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR52W1Q6IF63 320 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 GDPGP1Q6ZNW5 385 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 C5orf24Q7Z6I8 188 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR51A4Q8NGJ6 313 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR4P4Q8NGL7 312 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR10D4PQ8NGN7 298 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR5AK2Q8NH90 309 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 ZNF649Q9BS31 505 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 RSG1Q9BU20 258 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 CST9LQ9H4G1 147 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 BEX1Q9HBH7 125 aa9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 FGF20Q9NP95 211 aaPredicted RBP9.39□□□□□ -0.91
HLA-DOB-208ENST00000475235 F8VVB4 439 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 F8VWA3 439 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 SNAI2O43623 268 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 ZNF737O75373 536 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 NDUFA7O95182 113 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 F2RP25116 425 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR10A3P58181 314 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 KLRD1Q13241 179 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 TMPRSS11AQ6ZMR5 421 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 TMUB2Q71RG4 321 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 ZSCAN4Q8NAM6 433 aaPredicted RBP9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 BEST4Q8NFU0 473 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR2AK2Q8NG84 335 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR5D14Q8NGL3 314 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR10AC1Q8NH08 325 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 PTH2Q96A98 100 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 SNX22Q96L94 193 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 TP53RKQ96S44 253 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 ASCL2Q99929 193 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 DHDHQ9UQ10 334 aa9.38□□□□□ -0.91
HLA-DOB-208ENST00000475235 KIR2DL5BA0A0G2JN68 375 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 KIR2DL5BA0A0G2JPC4 375 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 A0A1W2PRD5 423 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 A0A1W2PRF3 423 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 A0A1W2PRM7 423 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 SMCO3A2RU48 225 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 LANCL1O43813 399 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 ANGPTL7O43827 346 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 GPR137BO60478 399 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 HAND1O96004 215 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 RBP4P02753 201 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 LIMS3P0CW19 117 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 LIMS4P0CW20 117 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 AKR1C4P17516 323 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 BCL3P20749 454 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 MDKP21741 143 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 DLX1P56177 255 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 EDDM3BP56851 147 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 PRB3Q04118 309 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 MEF2CQ06413 473 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 HERPUD1Q15011 391 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 ZNF146Q15072 292 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 SMN1Q16637 294 aaKnown RBP9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 TIMM50Q3ZCQ8 353 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 IDNKQ5T6J7 187 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 PRR27Q6MZM9 219 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 CCDC144NLQ6NUI1 221 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 GSG1LQ6UXU4 331 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 AHSA2Q719I0 299 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 SAXO1Q8IYX7 474 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 KIR2DL5AQ8N109 375 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 OR10X1Q8NGY0 326 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 C11orf54Q9H0W9 315 aaPredicted RBP9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 C1RLQ9NZP8 487 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 VPREB3Q9UKI3 123 aa9.37□□□□□ -0.91
HLA-DOB-208ENST00000475235 hADV38S2A0JD32 116 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 HMSDA8MTL9 139 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 C17orf98A8MV24 154 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 INMT-MINDY4F8WBC2 141 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 CORTO00230 105 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 GPR31O00270 319 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 PPP1R2P9O14990 202 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 SPRY1O43609 319 aaPredicted RBP9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 IGHG4P01861 327 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 CD37P11049 281 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 PIPP12273 146 aaPredicted RBP9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 CCL3L1P16619 93 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 RAB5AP20339 215 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 OMGP23515 440 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 NPBWR2P48146 333 aa9.36□□□□□ -0.91
HLA-DOB-208ENST00000475235 C1orf194Q5T5A4 169 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms