RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 S100ZQ8WXG8 99 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 FLYWCH2Q96CP2 140 aaKnown RBP5.51□□□□□ -1.53
LIMD1-204ENST00000474665 RNF5Q99942 180 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 PRRT1Q99946 306 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 CCDC32Q9BV29 185 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 WNT10AQ9GZT5 417 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 RANBP3Q9H6Z4 567 aaPredicted RBP5.51□□□□□ -1.53
LIMD1-204ENST00000474665 RAB18Q9NP72 206 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 MCUBQ9NWR8 336 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 FBXO7Q9Y3I1 522 aa5.51□□□□□ -1.53
LIMD1-204ENST00000474665 IGHV7-81A0A0B4J1V7 117 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 TRAV3A0A0B4J244 114 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 A0A1B0GW64 132 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 CLPSL1A2RUU4 121 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 M0QZK8 103 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 ARPC1BO15143 372 aaKnown RBP5.5□□□□□ -1.53
LIMD1-204ENST00000474665 S1PR2O95136 353 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 IGHG2P01859 326 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 HLA-DRB1P01911 266 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 APOA2P02652 100 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 P0C879 139 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 SAA1P0DJI8 122 aaPredicted RBP5.5□□□□□ -1.53
LIMD1-204ENST00000474665 PGAM2P15259 253 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 LGALS7P47929 136 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 PIGPP57054 158 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 AP3S2P59780 193 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 UBE2KP61086 200 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 SUPT4H1P63272 117 aaKnown RBP5.5□□□□□ -1.53
LIMD1-204ENST00000474665 TAGLNQ01995 201 aaKnown RBP5.5□□□□□ -1.53
LIMD1-204ENST00000474665 ZNF846Q147U1 533 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 SURF2Q15527 256 aaPredicted RBP5.5□□□□□ -1.53
LIMD1-204ENST00000474665 RTL8BQ17RB0 113 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 C19orf54Q5BKX5 351 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 TCTEX1D4Q5JR98 221 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 TRIQKQ629K1 86 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 ZNF57Q68EA5 555 aaPredicted RBP5.5□□□□□ -1.53
LIMD1-204ENST00000474665 TBC1D26Q86UD7 250 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 PUSL1Q8N0Z8 303 aaKnown RBP5.5□□□□□ -1.53
LIMD1-204ENST00000474665 OR4F5Q8NH21 305 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 GLYATL2Q8WU03 294 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 DEDD2Q8WXF8 326 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 HARBI1Q96MB7 349 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 NOL4LQ96MY1 436 aaPredicted RBP5.5□□□□□ -1.53
LIMD1-204ENST00000474665 TP53RKQ96S44 253 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 PRSS22Q9GZN4 317 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 LIN7CQ9NUP9 197 aaKnown RBP5.5□□□□□ -1.53
LIMD1-204ENST00000474665 FLVCR2Q9UPI3 526 aa5.5□□□□□ -1.53
LIMD1-204ENST00000474665 TENM3Q9P273 2699 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 E7EUB6 86 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 SHOXO15266 292 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 LYRM1O43325 122 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 UPK1BO75841 260 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 SPDEFO95238 335 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 CRYBA1P05813 215 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 RRASP10301 218 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 MYOD1P15172 320 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 LPAR6P43657 344 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 CX3CL1P78423 397 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 CFHR3Q02985 330 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 ASAH1Q13510 395 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 POU2AF1Q16633 256 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 SP6Q3SY56 376 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 LIN54Q6MZP7 749 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 C11orf87Q6NUJ2 197 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 LPCAT3Q6P1A2 487 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 CMTM1Q8IZ96 169 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 OR4S2Q8NH73 311 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 LHFPL5Q8TAF8 219 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 OSR1Q8TAX0 266 aaPredicted RBP5.49□□□□□ -1.53
LIMD1-204ENST00000474665 ZFAND1Q8TCF1 268 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 WFDC12Q8WWY7 111 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 ZNF486Q96H40 463 aaPredicted RBP5.49□□□□□ -1.53
LIMD1-204ENST00000474665 SEC22AQ96IW7 307 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 RHOVQ96L33 236 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 CLCC1Q96S66 551 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 TSNAXQ99598 290 aaKnown RBP5.49□□□□□ -1.53
LIMD1-204ENST00000474665 WDR12Q9GZL7 423 aaKnown RBP5.49□□□□□ -1.53
LIMD1-204ENST00000474665 ZNF430Q9H8G1 570 aaPredicted RBP5.49□□□□□ -1.53
LIMD1-204ENST00000474665 PLEKHA2Q9HB19 425 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 METTL1Q9UBP6 276 aaKnown RBP5.49□□□□□ -1.53
LIMD1-204ENST00000474665 LINC00527Q9UJ94 153 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 SCP2D1Q9UJQ7 156 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 PRELID3BQ9Y3B1 194 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 RNF114Q9Y508 228 aa5.49□□□□□ -1.53
LIMD1-204ENST00000474665 A0A0G2JRQ6 117 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 NAP1L6A6NFF2 107 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 CRYM-AS1A6NIL9 109 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 CGB1A6NKQ9 187 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 DBX1A6NMT0 343 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 G3V318 75 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 H0Y980 276 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 ATP6V0E1O15342 81 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 SOX15O60248 233 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 NDUFB6O95139 128 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 HPRT1P00492 218 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 CA2P00918 260 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 IGKV1-5P01602 117 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 IGF1P05019 195 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 OR5AC1P0C628 307 aa5.48□□□□□ -1.53
LIMD1-204ENST00000474665 RPA2P15927 270 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms