RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 ICAM4Q14773 271 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 ZNF726P1Q15940 193 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 TMEM41BQ5BJD5 291 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 TMEM200BQ69YZ2 307 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 LYPD2Q6UXB3 125 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 LYG1Q8N1E2 194 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 Q8N7P7 452 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 CLDND2Q8NHS1 167 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 ZNF714Q96N38 554 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 GGACTQ9BVM4 153 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 SLC35B3Q9H1N7 401 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 VSIRQ9H7M9 311 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 TMEM14BQ9NUH8 114 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 ASPMQ8IZT6 3477 aa8.04□□□□□ -1.12
USP39-214ENST00000474572 IGHV1-69-2A0A0G2JMI3 117 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 LOC102723971A0A1B0GUV8 181 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 A0A1W2PPE3 182 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 FAM90A27PA6NNH2 459 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 SOX15O60248 233 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 PLAUP00749 431 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 CT45A6P0DMU7 189 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 CT45A5P0DMU8 189 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 CT45A7P0DMV0 189 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 CCL3L1P16619 93 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 NFYBP25208 207 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 GNG10P50151 68 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 ZNF137PP52743 207 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 OR2B8PP59922 312 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 RAB2AP61019 212 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 RPP30P78346 268 aaKnown RBP8.03□□□□□ -1.12
USP39-214ENST00000474572 ZNF672Q499Z4 452 aaPredicted RBP8.03□□□□□ -1.12
USP39-214ENST00000474572 TMEM155Q4W5P6 130 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 KHDC3LQ587J8 217 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 LRRC10Q5BKY1 277 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 OR8G2PQ6IF36 304 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 OR4A47Q6IF82 309 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 OR10G4Q8NGN3 311 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 OR4A16Q8NH70 328 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 LINC01560Q8TB33 94 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 CCL17Q92583 94 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 RCC1LQ96I51 464 aaKnown RBP8.03□□□□□ -1.12
USP39-214ENST00000474572 EIF5A2Q9GZV4 153 aaKnown RBP8.03□□□□□ -1.12
USP39-214ENST00000474572 PRORYQ9H606 182 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 TCF19Q9Y242 345 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 WDR83OSQ9Y284 106 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 ACACAQ13085 2346 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 ARFGEF3Q5TH69 2177 aa8.03□□□□□ -1.12
USP39-214ENST00000474572 PLCE1Q9P212 2302 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 MGAQ8IWI9 3026 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 TRBV23-1A0A0A0MS06 115 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 TRAV3A0A0B4J244 114 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 DVL1O14640 695 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 TSPAN4O14817 238 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 HRASP01112 189 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 IFNA17P01571 189 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 IGKV1D-33P01593 117 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 IGKV1-33P01594 117 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 SFTPCP11686 197 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 GRNP28799 593 aaKnown RBP8.02□□□□□ -1.13
USP39-214ENST00000474572 HSPE1P61604 102 aaKnown RBP8.02□□□□□ -1.13
USP39-214ENST00000474572 DLK1P80370 383 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 TFF3Q07654 80 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 CDSNQ15517 529 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 HFEQ30201 348 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 ACSM6Q6P461 480 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 SSX9Q7RTT3 188 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 SSX7Q7RTT5 188 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 ST6GALNAC6Q969X2 333 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 RAB39BQ96DA2 213 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 RHOVQ96L33 236 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 RARRES2Q99969 163 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 UNKLQ9H9P5 680 aaKnown RBP8.02□□□□□ -1.13
USP39-214ENST00000474572 SLC35D1Q9NTN3 355 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 BET1LQ9NYM9 111 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 CISD1Q9NZ45 108 aaKnown RBP8.02□□□□□ -1.13
USP39-214ENST00000474572 ZNF257Q9Y2Q1 563 aa8.02□□□□□ -1.13
USP39-214ENST00000474572 FNDC10F2Z333 226 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 UPK2O00526 184 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 NUPL2O15504 423 aaKnown RBP8.01□□□□□ -1.13
USP39-214ENST00000474572 RBMXL2O75526 392 aaKnown RBP8.01□□□□□ -1.13
USP39-214ENST00000474572 IGHV2-70P01814 119 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 MBP02144 154 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 C1QTNF9P0C862 333 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 FGF7P21781 194 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 RHEBQ15382 184 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 RTL8BQ17RB0 113 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 TMEM177Q53S58 311 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 AWAT1Q58HT5 328 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 SPINK9Q5DT21 86 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 ZNF787Q6DD87 383 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 CBLN2Q8IUK8 224 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 VKORC1L1Q8N0U8 176 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 MUC15Q8N387 334 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 RPP25LQ8N5L8 163 aaKnown RBP8.01□□□□□ -1.13
USP39-214ENST00000474572 C11orf42Q8N5U0 333 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 OR5AN1Q8NGI8 311 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 OR13D1Q8NGV5 346 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 SFT2D1Q8WV19 159 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 TMEM170AQ8WVE7 144 aa8.01□□□□□ -1.13
USP39-214ENST00000474572 TMEM186Q96B77 213 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms