RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 UBL4BQ8N7F7 174 aa0.91□□□□□ -2.26
ECHDC1-213ENST00000474240 PACRGQ96M98 296 aaPredicted RBP0.91□□□□□ -2.26
ECHDC1-213ENST00000474240 FAM96AQ9H5X1 160 aa0.91□□□□□ -2.26
ECHDC1-213ENST00000474240 ANGPT4Q9Y264 503 aa0.91□□□□□ -2.26
ECHDC1-213ENST00000474240 AMMECR1Q9Y4X0 333 aaPredicted RBP0.91□□□□□ -2.26
ECHDC1-213ENST00000474240 FLT4P35916 1363 aa0.91□□□□□ -2.26
ECHDC1-213ENST00000474240 DICER1Q9UPY3 1922 aaKnown RBP0.91□□□□□ -2.26
ECHDC1-213ENST00000474240 GOLGA6L10A6NI86 522 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 GOLGA8MH3BSY2 632 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 AZIN1O14977 448 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 MSMBP08118 114 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 HIST1H1CP16403 213 aaKnown RBP0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 TMED1Q13445 227 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 TNFAIP8L2Q6P589 184 aaPredicted RBP0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 DNM1P34Q6PK57 102 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 C7orf65Q6ZTY9 151 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 BOD1L2Q8IYS8 172 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 OR1L8Q8NGR8 309 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 SLC37A2Q8TED4 501 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 RAB2BQ8WUD1 216 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 SLC22A4Q9H015 551 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 SNURFQ9Y675 71 aa0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 PRRC2BQ5JSZ5 2229 aaKnown RBP0.9□□□□□ -2.27
ECHDC1-213ENST00000474240 RP1L1Q8IWN7 2480 aaPredicted RBP0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 LAMB2P55268 1798 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 REREQ9P2R6 1566 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 TRAV7A0A075B6U4 112 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 IGHV1-18A0A0C4DH31 117 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 FAM25EA8MYX2 175 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 C21orf140B9A014 251 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 C9JCJ5 164 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 SMLR1H3BR10 107 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 MRPS14O60783 128 aaKnown RBP0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 ZNF737O75373 536 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 TRGC1P0CF51 173 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 NFYAP23511 347 aaPredicted RBP0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 PLCXD2Q0VAA5 305 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 LRRC26Q2I0M4 334 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 DEFB115Q30KQ5 88 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 FAM78BQ5VT40 261 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 UNQ6190/PRO20217Q6UXQ8 127 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 PLEKHG7Q6ZR37 379 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 HIST2H3AQ71DI3 136 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 FP248Q71RG6 208 aaPredicted RBP0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 NAA40Q86UY6 237 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 CD302Q8IX05 232 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 FAM9CQ8IZT9 166 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 SPACA4Q8TDM5 124 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 ASB13Q8WXK3 278 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 IMMP2LQ96T52 175 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 CCL13Q99616 98 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 C7orf50Q9BRJ6 194 aaKnown RBP0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 TP53TG1Q9Y2A0 90 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 KMT2BQ9UMN6 2715 aaPredicted RBP0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 CCDC88CQ9P219 2028 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 SYNRGQ9UMZ2 1314 aa0.89□□□□□ -2.27
ECHDC1-213ENST00000474240 TMEM269A0A1B0GVZ9 245 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 FUOMA2VDF0 154 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 MEIS3P1A6NDR6 274 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 DISC1C4P0D8 188 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 SDCBPO00560 298 aaPredicted RBP0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 PPBPP02775 128 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 LGALS1P09382 135 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 RAB14P61106 215 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 RPS24P62847 133 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 CDK5R1Q15078 307 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 Q8N402 240 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 RPP25LQ8N5L8 163 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 Q96M85 177 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 RETNLBQ9BQ08 111 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 MRPL57Q9BQC6 102 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 ADAT1Q9BUB4 502 aaKnown RBP0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 TTTY13Q9BZ97 58 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 OR51I2Q9H344 312 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 GPR84Q9NQS5 396 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 NAT8Q9UHE5 227 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 AK3Q9UIJ7 227 aa0.88□□□□□ -2.27
ECHDC1-213ENST00000474240 EIF4G1Q04637 1599 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 IGHV1-69-2A0A0G2JMI3 117 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 TRAPPC13A5PLN9 417 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 IQCF5A8MTL0 148 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 H3BT86 120 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 SLC22A1O15245 554 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 NOS1APO75052 506 aaPredicted RBP0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 APOMO95445 188 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 METTL15P1P0C7V9 234 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 CXCL2P19875 107 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 CXCL3P19876 107 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 RPL28P46779 137 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 CSN1S1P47710 185 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 RAB13P51153 203 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 CXCR4P61073 352 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 RPL30P62888 115 aaKnown RBP0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 CAV1Q03135 178 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 EMX1Q04741 257 aaPredicted RBP0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 FABP9Q0Z7S8 132 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 LGALS9BQ3B8N2 356 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 ARHGAP11BQ3KRB8 267 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 FUNDC1Q8IVP5 155 aa0.87□□□□□ -2.27
ECHDC1-213ENST00000474240 LINC00471Q8N535 108 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms