RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 PPP1R1AQ13522 171 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 HES1Q14469 280 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 MMDQ15546 238 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 TMEM95Q3KNT9 176 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 ANKRD55Q3KP44 614 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 C19orf54Q5BKX5 351 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 DHRS7BQ6IAN0 325 aaPredicted RBP8.19□□□□□ -1.1
CASC3-204ENST00000474190 C16orf82Q7Z2V1 217 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 CMTM1Q8IZ96 169 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 OR8H1Q8NGG4 311 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 FLYWCH2Q96CP2 140 aaKnown RBP8.19□□□□□ -1.1
CASC3-204ENST00000474190 TMEM222Q9H0R3 208 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 ALX4Q9H161 411 aaPredicted RBP8.19□□□□□ -1.1
CASC3-204ENST00000474190 C20orf85Q9H1P6 137 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 FBXL15Q9H469 300 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 C16orf95Q9H693 158 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 PLEKHA2Q9HB19 425 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 SERTAD4Q9NUC0 356 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 MOB4Q9Y3A3 225 aa8.19□□□□□ -1.1
CASC3-204ENST00000474190 A0A0B4J293 547 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 TEX13DA0A0J9YY54 714 aaPredicted RBP8.18□□□□□ -1.1
CASC3-204ENST00000474190 DBX1A6NMT0 343 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 H7C2Y5 167 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 SLC25A17O43808 307 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 NDUFA7O95182 113 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 CDS2O95674 445 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 HPRT1P00492 218 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 IGHG2P01859 326 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 HLA-DRB1P01911 266 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 APOA2P02652 100 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 RRASP10301 218 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 MYOD1P15172 320 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 KIR2DS2P43631 304 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 LGALS7P47929 136 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 ARHGDIBP52566 201 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 KRTAP10-3P60369 221 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 UBE2KP61086 200 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 RPL15P61313 204 aaKnown RBP8.18□□□□□ -1.1
CASC3-204ENST00000474190 RPS16P62249 146 aaKnown RBP8.18□□□□□ -1.1
CASC3-204ENST00000474190 RTL8BQ17RB0 113 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 IZUMO4Q1ZYL8 232 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 ABCA11PQ4W5N1 156 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 Q6ZRM9 215 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 CADM3Q8N126 398 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 TCTEX1D1Q8N7M0 179 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 OR4S2Q8NH73 311 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 LINC01006Q8NI28 216 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 OSR1Q8TAX0 266 aaPredicted RBP8.18□□□□□ -1.1
CASC3-204ENST00000474190 HARBI1Q96MB7 349 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 TMEM56Q96MV1 263 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 JMJD8Q96S16 334 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 WNT10AQ9GZT5 417 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 PALMDQ9NP74 551 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 NUDT15Q9NV35 164 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 PITPNC1Q9UKF7 332 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 PRELID3BQ9Y3B1 194 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 TMEM56-RWDD3S4R434 201 aa8.18□□□□□ -1.1
CASC3-204ENST00000474190 TNCP24821 2201 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 C9orf170A2RU37 121 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 SPDEFO95238 335 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 SFT2D2O95562 160 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 IFNA2P01563 188 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 OR9G9P0C7N8 305 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 HKR1P10072 659 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 AKR1C4P17516 323 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 INPP1P49441 399 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 TAS2R31P59538 309 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 CX3CL1P78423 397 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 CFHR3Q02985 330 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 TMEM128Q5BJH2 165 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 ASPHD1Q5U4P2 390 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 OR4A47Q6IF82 309 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 TMED4Q7Z7H5 227 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 SELENOHQ8IZQ5 122 aaKnown RBP8.17□□□□□ -1.1
CASC3-204ENST00000474190 TEX45Q8NA69 505 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 POC5Q8NA72 575 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 OR52B4Q8NGK2 314 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 TMEM167AQ8TBQ9 72 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 CD300LFQ8TDQ1 290 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 TMEM158Q8WZ71 300 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 RHOVQ96L33 236 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 MARVELD1Q9BSK0 173 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 RANBP3Q9H6Z4 567 aaPredicted RBP8.17□□□□□ -1.1
CASC3-204ENST00000474190 LIN7CQ9NUP9 197 aaKnown RBP8.17□□□□□ -1.1
CASC3-204ENST00000474190 COMMD9Q9P000 198 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 COPZ2Q9P299 210 aa8.17□□□□□ -1.1
CASC3-204ENST00000474190 C14orf166Q9Y224 244 aaKnown RBP8.17□□□□□ -1.1
CASC3-204ENST00000474190 TRAV6A0A075B6T7 132 aa8.16□□□□□ -1.1
CASC3-204ENST00000474190 TMEM89A2RUT3 159 aa8.16□□□□□ -1.1
CASC3-204ENST00000474190 BTBD17A6NE02 478 aa8.16□□□□□ -1.1
CASC3-204ENST00000474190 MARCH11A6NNE9 402 aa8.16□□□□□ -1.1
CASC3-204ENST00000474190 NCBP2LA6PVI3 153 aaKnown RBP8.16□□□□□ -1.1
CASC3-204ENST00000474190 CENPXA8MT69 81 aa8.16□□□□□ -1.1
CASC3-204ENST00000474190 TRIM77I1YAP6 450 aa8.16□□□□□ -1.1
CASC3-204ENST00000474190 SHOXO15266 292 aa8.16□□□□□ -1.1
CASC3-204ENST00000474190 PLXNB1O43157 2135 aa8.16□□□□□ -1.1
CASC3-204ENST00000474190 OR4E1P0C645 316 aa8.16□□□□□ -1.1
CASC3-204ENST00000474190 RPA2P15927 270 aa8.16□□□□□ -1.1
CASC3-204ENST00000474190 G6PCP35575 357 aa8.16□□□□□ -1.1
CASC3-204ENST00000474190 CRIP2P52943 208 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms