RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 TAS2R8Q9NYW2 309 aa13.85□□□□□ -0.19
UPF3A-203ENST00000474056 H3BUA1 57 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 OVOL1O14753 267 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 PPYP01298 95 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 SMIM18P0DKX4 95 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 BRWD1-AS2P59051 145 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 TAS2R20P59543 309 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 DEFA5Q01523 94 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 CDK10Q15131 360 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 MFSD4AQ8N468 514 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 SRSF12Q8WXF0 261 aaKnown RBP13.84□□□□□ -0.19
UPF3A-203ENST00000474056 ACOT12Q8WYK0 555 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 TMEM68Q96MH6 324 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 PHB2Q99623 299 aa13.84□□□□□ -0.19
UPF3A-203ENST00000474056 HSD17B10Q99714 261 aaKnown RBP13.84□□□□□ -0.19
UPF3A-203ENST00000474056 ZNF430Q9H8G1 570 aaPredicted RBP13.84□□□□□ -0.19
UPF3A-203ENST00000474056 MRPS7Q9Y2R9 242 aaKnown RBP13.84□□□□□ -0.19
UPF3A-203ENST00000474056 TNFSF12O43508 249 aa13.83□□□□□ -0.2
UPF3A-203ENST00000474056 RAMP3O60896 148 aa13.83□□□□□ -0.2
UPF3A-203ENST00000474056 ECI1P42126 302 aa13.83□□□□□ -0.2
UPF3A-203ENST00000474056 TMEM69Q5SWH9 247 aa13.83□□□□□ -0.2
UPF3A-203ENST00000474056 VKORC1L1Q8N0U8 176 aa13.83□□□□□ -0.2
UPF3A-203ENST00000474056 OR5AP2Q8NGF4 316 aa13.83□□□□□ -0.2
UPF3A-203ENST00000474056 OR4S2Q8NH73 311 aa13.83□□□□□ -0.2
UPF3A-203ENST00000474056 PRR25Q96S07 402 aa13.83□□□□□ -0.2
UPF3A-203ENST00000474056 IFT46Q9NQC8 304 aa13.83□□□□□ -0.2
UPF3A-203ENST00000474056 ZMAT5Q9UDW3 170 aaKnown RBP13.83□□□□□ -0.2
UPF3A-203ENST00000474056 MSGN1A6NI15 193 aa13.82□□□□□ -0.2
UPF3A-203ENST00000474056 HSPB1P04792 205 aaKnown RBP13.82□□□□□ -0.2
UPF3A-203ENST00000474056 EIF4EP06730 217 aaKnown RBP13.82□□□□□ -0.2
UPF3A-203ENST00000474056 FXYD4P59646 89 aa13.82□□□□□ -0.2
UPF3A-203ENST00000474056 C10orf55Q5SWW7 151 aa13.82□□□□□ -0.2
UPF3A-203ENST00000474056 ZNF66Q6ZN08 573 aa13.82□□□□□ -0.2
UPF3A-203ENST00000474056 KCTD12Q96CX2 325 aaKnown RBP13.82□□□□□ -0.2
UPF3A-203ENST00000474056 TINAGL1Q9GZM7 467 aaPredicted RBP13.82□□□□□ -0.2
UPF3A-203ENST00000474056 NAA50Q9GZZ1 169 aaKnown RBP13.82□□□□□ -0.2
UPF3A-203ENST00000474056 COA4Q9NYJ1 87 aa13.82□□□□□ -0.2
UPF3A-203ENST00000474056 COMMD3Q9UBI1 195 aa13.82□□□□□ -0.2
UPF3A-203ENST00000474056 ANAPC10Q9UM13 185 aa13.82□□□□□ -0.2
UPF3A-203ENST00000474056 C13orf42A0A1B0GVH6 325 aa13.81□□□□□ -0.2
UPF3A-203ENST00000474056 MSMO1Q15800 293 aa13.81□□□□□ -0.2
UPF3A-203ENST00000474056 MMD2Q8IY49 270 aa13.81□□□□□ -0.2
UPF3A-203ENST00000474056 SLC5A7Q9GZV3 580 aa13.81□□□□□ -0.2
UPF3A-203ENST00000474056 CREBL2O60519 120 aaPredicted RBP13.8□□□□□ -0.2
UPF3A-203ENST00000474056 SAP30O75446 220 aa13.8□□□□□ -0.2
UPF3A-203ENST00000474056 RBMXL2O75526 392 aaKnown RBP13.8□□□□□ -0.2
UPF3A-203ENST00000474056 KBTBD11O94819 623 aa13.8□□□□□ -0.2
UPF3A-203ENST00000474056 INSL3P51460 131 aa13.8□□□□□ -0.2
UPF3A-203ENST00000474056 ZNF818PQ6ZRF7 136 aa13.8□□□□□ -0.2
UPF3A-203ENST00000474056 TMEM17Q86X19 198 aa13.8□□□□□ -0.2
UPF3A-203ENST00000474056 PUSL1Q8N0Z8 303 aaKnown RBP13.8□□□□□ -0.2
UPF3A-203ENST00000474056 ADAD2Q8NCV1 583 aaKnown RBP13.8□□□□□ -0.2
UPF3A-203ENST00000474056 GIMAP1Q8WWP7 306 aa13.8□□□□□ -0.2
UPF3A-203ENST00000474056 EHFQ9NZC4 300 aa13.8□□□□□ -0.2
UPF3A-203ENST00000474056 A0A0G2JLM5 398 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 MPPED1O15442 326 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 ACTL6BO94805 426 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 OR2A4O95047 310 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 BRI3O95415 125 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 OR9G9P0C7N8 305 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 KIR2DS2P43631 304 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 RFX2P48378 723 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 DYRK1AQ13627 763 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 ACSM6Q6P461 480 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 SSX9Q7RTT3 188 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 ZNF429Q86V71 674 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 ANKRD13BQ86YJ7 626 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 ZBTB34Q8NCN2 500 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 OR2A7Q96R45 310 aa13.79□□□□□ -0.2
UPF3A-203ENST00000474056 ANKRD34BA5PLL1 514 aa13.78□□□□□ -0.2
UPF3A-203ENST00000474056 GABARAPO95166 117 aa13.78□□□□□ -0.2
UPF3A-203ENST00000474056 PMP2P02689 132 aa13.78□□□□□ -0.2
UPF3A-203ENST00000474056 NAT1P18440 290 aa13.78□□□□□ -0.2
UPF3A-203ENST00000474056 PRSS3P35030 304 aa13.78□□□□□ -0.2
UPF3A-203ENST00000474056 SPAG16Q8N0X2 631 aa13.78□□□□□ -0.2
UPF3A-203ENST00000474056 VSTM2AQ8TAG5 236 aa13.78□□□□□ -0.2
UPF3A-203ENST00000474056 TMEM167AQ8TBQ9 72 aa13.78□□□□□ -0.2
UPF3A-203ENST00000474056 CMTM3Q96MX0 182 aa13.78□□□□□ -0.2
UPF3A-203ENST00000474056 ZNF2Q9BSG1 426 aaPredicted RBP13.78□□□□□ -0.2
UPF3A-203ENST00000474056 RANGRFQ9HD47 186 aaPredicted RBP13.78□□□□□ -0.2
UPF3A-203ENST00000474056 ZNF256Q9Y2P7 627 aaPredicted RBP13.78□□□□□ -0.2
UPF3A-203ENST00000474056 LSM4Q9Y4Z0 139 aaKnown RBP13.78□□□□□ -0.2
UPF3A-203ENST00000474056 HMX3A6NHT5 357 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 E7EUB6 86 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 SULT1C2O00338 296 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 HPGDSO60760 199 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 APOA1P02647 267 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 PRH1P02810 166 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 HERV-K104P61576 105 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 CATR1Q13166 79 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 DCTN2Q13561 401 aaKnown RBP13.77□□□□□ -0.21
UPF3A-203ENST00000474056 CTF1Q16619 201 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 GPX8Q8TED1 209 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 SPIN2AQ99865 258 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 B9D2Q9BPU9 175 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 SPIN2BQ9BPZ2 258 aa13.77□□□□□ -0.21
UPF3A-203ENST00000474056 TEX22C9J3V5 150 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 LY86O95711 162 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 HRASP01112 189 aa13.76□□□□□ -0.21
UPF3A-203ENST00000474056 TRBV12-3P01733 135 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms