RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TAAR6Q96RI8 345 aa17.58■□□□□ 0.41
COL18A1-207ENST00000473212 WASF3Q9UPY6 502 aa17.58■□□□□ 0.41
COL18A1-207ENST00000473212 MARCH11A6NNE9 402 aa17.58■□□□□ 0.4
COL18A1-207ENST00000473212 J3QW42 95 aa17.58■□□□□ 0.4
COL18A1-207ENST00000473212 FABP6P51161 128 aa17.58■□□□□ 0.4
COL18A1-207ENST00000473212 EDDM3BP56851 147 aa17.58■□□□□ 0.4
COL18A1-207ENST00000473212 MRPL41Q8IXM3 137 aaKnown RBP17.58■□□□□ 0.4
COL18A1-207ENST00000473212 PSG11Q9UQ72 335 aa17.58■□□□□ 0.4
COL18A1-207ENST00000473212 PTPRBP23467 1997 aa17.57■□□□□ 0.4
COL18A1-207ENST00000473212 PGPEP1LA6NFU8 196 aa17.57■□□□□ 0.4
COL18A1-207ENST00000473212 IFNL4K9M1U5 179 aa17.57■□□□□ 0.4
COL18A1-207ENST00000473212 NDUFB4O95168 129 aa17.57■□□□□ 0.4
COL18A1-207ENST00000473212 HES3Q5TGS1 186 aa17.57■□□□□ 0.4
COL18A1-207ENST00000473212 TRIB1Q96RU8 372 aa17.57■□□□□ 0.4
COL18A1-207ENST00000473212 RP1L1Q8IWN7 2480 aaPredicted RBP17.57■□□□□ 0.4
COL18A1-207ENST00000473212 TMEM210A6NLX4 147 aa17.57■□□□□ 0.4
COL18A1-207ENST00000473212 CNN1P51911 297 aaKnown RBP17.57■□□□□ 0.4
COL18A1-207ENST00000473212 SSX2Q16385 188 aa17.57■□□□□ 0.4
COL18A1-207ENST00000473212 VWA1Q6PCB0 445 aa17.57■□□□□ 0.4
COL18A1-207ENST00000473212 FAM234AQ9H0X4 552 aa17.57■□□□□ 0.4
COL18A1-207ENST00000473212 OR9G9P0C7N8 305 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 C1QTNF9P0C862 333 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 CD82P27701 267 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 CD1BP29016 333 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 USF2Q15853 346 aaPredicted RBP17.56■□□□□ 0.4
COL18A1-207ENST00000473212 PATZ1Q9HBE1 687 aaKnown RBP17.56■□□□□ 0.4
COL18A1-207ENST00000473212 A0A0U1RQK1 487 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 ZNF320A2RRD8 509 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 EDDM3AQ14507 147 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 WDR82Q6UXN9 313 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 ZNF114Q8NC26 417 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 DIRC2Q96SL1 478 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 C2orf88Q9BSF0 95 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 NDUFAF3Q9BU61 184 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 WDR83OSQ9Y284 106 aa17.56■□□□□ 0.4
COL18A1-207ENST00000473212 MGAQ8IWI9 3026 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 PDE6DO43924 150 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 OR4A8P0C604 315 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 ZNF883P0CG24 379 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 SOX8P57073 446 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 UTF1Q5T230 341 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 ACP7Q6ZNF0 438 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 ZDHHC11Q9H8X9 412 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 PROP1O75360 226 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 LCN2P80188 198 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 ALKBH2Q6NS38 261 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 VKORC1L1Q8N0U8 176 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 R3HDM4Q96D70 268 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 GMPPAQ96IJ6 420 aaPredicted RBP17.55■□□□□ 0.4
COL18A1-207ENST00000473212 TRAPPC1Q9Y5R8 145 aa17.55■□□□□ 0.4
COL18A1-207ENST00000473212 CNOT1A5YKK6 2376 aaKnown RBP17.55■□□□□ 0.4
COL18A1-207ENST00000473212 MAP1BP46821 2468 aaKnown RBP17.55■□□□□ 0.4
COL18A1-207ENST00000473212 A0A1W2PPV4 95 aa17.54■□□□□ 0.4
COL18A1-207ENST00000473212 RPL15P61313 204 aaKnown RBP17.54■□□□□ 0.4
COL18A1-207ENST00000473212 GBGT1Q8N5D6 347 aa17.54■□□□□ 0.4
COL18A1-207ENST00000473212 TCTEX1D1Q8N7M0 179 aa17.54■□□□□ 0.4
COL18A1-207ENST00000473212 SDSLQ96GA7 329 aa17.54■□□□□ 0.4
COL18A1-207ENST00000473212 TET2Q6N021 2002 aaPredicted RBP17.54■□□□□ 0.4
COL18A1-207ENST00000473212 A0A1B0GUS0 222 aa17.54■□□□□ 0.4
COL18A1-207ENST00000473212 FOXF2Q12947 444 aa17.54■□□□□ 0.4
COL18A1-207ENST00000473212 FER1L6-AS2Q96M78 137 aa17.54■□□□□ 0.4
COL18A1-207ENST00000473212 HSD17B10Q99714 261 aaKnown RBP17.54■□□□□ 0.4
COL18A1-207ENST00000473212 TMEM204Q9BSN7 226 aa17.54■□□□□ 0.4
COL18A1-207ENST00000473212 TMPRSS2O15393 492 aa17.53■□□□□ 0.4
COL18A1-207ENST00000473212 KCNIP2Q9NS61 270 aa17.53■□□□□ 0.4
COL18A1-207ENST00000473212 CACNA1HO95180 2353 aa17.53■□□□□ 0.4
COL18A1-207ENST00000473212 PAX5Q02548 391 aa17.53■□□□□ 0.4
COL18A1-207ENST00000473212 TGFBR3Q03167 851 aa17.53■□□□□ 0.4
COL18A1-207ENST00000473212 TMEM144Q7Z5S9 345 aa17.53■□□□□ 0.4
COL18A1-207ENST00000473212 CCKARP32238 428 aa17.52■□□□□ 0.4
COL18A1-207ENST00000473212 LBHQ53QV2 105 aaPredicted RBP17.52■□□□□ 0.4
COL18A1-207ENST00000473212 WDR31Q8NA23 367 aa17.52■□□□□ 0.4
COL18A1-207ENST00000473212 CLCF1Q9UBD9 225 aa17.52■□□□□ 0.4
COL18A1-207ENST00000473212 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.52■□□□□ 0.39
COL18A1-207ENST00000473212 RBFOX2O43251 390 aaKnown RBP eCLIP17.52■□□□□ 0.392e-7■■■□□ 16.9
COL18A1-207ENST00000473212 TIMM8AO60220 97 aaPredicted RBP17.52■□□□□ 0.39
COL18A1-207ENST00000473212 FCGR3BO75015 233 aa17.52■□□□□ 0.39
COL18A1-207ENST00000473212 CD99P14209 185 aa17.52■□□□□ 0.39
COL18A1-207ENST00000473212 SPRNQ5BIV9 151 aa17.52■□□□□ 0.39
COL18A1-207ENST00000473212 TMEM256Q8N2U0 113 aa17.52■□□□□ 0.39
COL18A1-207ENST00000473212 CD177Q8N6Q3 437 aa17.52■□□□□ 0.39
COL18A1-207ENST00000473212 SP9P0CG40 484 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 ARL14EPLP0DKL9 152 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 SELLP14151 372 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 HNF1AP20823 631 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 FAM214BQ7L5A3 538 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 SGMS2Q8NHU3 365 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 Q8TCH9 128 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 RAB1CQ92928 201 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 TRBV20OR9-2A0A075B6H5 130 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 NKX2-8O15522 239 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 CECR9P0C854 216 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 IQCJQ1A5X6 159 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 C9orf106Q8NAJ2 232 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 BEND2Q8NDZ0 799 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 SFRP2Q96HF1 295 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 LURAP1Q96LR2 239 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 CXXC4Q9H2H0 198 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 PXMP4Q9Y6I8 212 aa17.51■□□□□ 0.39
COL18A1-207ENST00000473212 RRHO14718 337 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms