RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SRSF12Q8WXF0 261 aaKnown RBP11.68□□□□□ -0.54
VTI1A-203ENST00000472892 RCHY1Q96PM5 261 aa11.68□□□□□ -0.54
VTI1A-203ENST00000472892 ZNF430Q9H8G1 570 aaPredicted RBP11.68□□□□□ -0.54
VTI1A-203ENST00000472892 SSR3Q9UNL2 185 aa11.68□□□□□ -0.54
VTI1A-203ENST00000472892 RBMX2Q9Y388 322 aaKnown RBP11.68□□□□□ -0.54
VTI1A-203ENST00000472892 A8MZ25 164 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 SSX5O60225 188 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 FCGR3BO75015 233 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 TRBV12-3P01733 135 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 SYNJ2BPP57105 145 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 RPL30P62888 115 aaKnown RBP11.67□□□□□ -0.54
VTI1A-203ENST00000472892 DEFA5Q01523 94 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 CDK10Q15131 360 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 SFXN4Q6P4A7 337 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 DCUN1D5Q9BTE7 237 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 RSRP1Q9BUV0 290 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 Q9H521 79 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 ANXA10Q9UJ72 324 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 PRELID3BQ9Y3B1 194 aa11.67□□□□□ -0.54
VTI1A-203ENST00000472892 RRP15Q9Y3B9 282 aaKnown RBP11.67□□□□□ -0.54
VTI1A-203ENST00000472892 TRBV9A0A0B4J1U6 114 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 IGKV1D-13A0A0B4J2D9 117 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 CREBL2O60519 120 aaPredicted RBP11.66□□□□□ -0.54
VTI1A-203ENST00000472892 TUSC2O75896 110 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 SAA1P0DJI8 122 aaPredicted RBP11.66□□□□□ -0.54
VTI1A-203ENST00000472892 IGHV4-30-4P0DP06 118 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 IGKV1-13P0DP09 117 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 CD36P16671 472 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 SDC2P34741 201 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 GNG2P59768 71 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 EIF4EBP1Q13541 118 aaPredicted RBP11.66□□□□□ -0.54
VTI1A-203ENST00000472892 TATDN3Q17R31 274 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 KCTD9Q7L273 389 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 MMD2Q8IY49 270 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 TTC9CQ8N5M4 171 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 LGALS14Q8TCE9 139 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 ACOT12Q8WYK0 555 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 SNAPC3Q92966 411 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 SPIN2AQ99865 258 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 SPIN2BQ9BPZ2 258 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 OR51E2Q9H255 320 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 C19orf73Q9NVV2 129 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 RHBDL2Q9NX52 303 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 SIGLEC8Q9NYZ4 499 aa11.66□□□□□ -0.54
VTI1A-203ENST00000472892 FAM223BA6NKX1 122 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 H0Y980 276 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 MPPED1O15442 326 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 ACTL6BO94805 426 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 CSN3P07498 182 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 SCAND1P57086 179 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 BRWD1-AS2P59051 145 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 RHOGP84095 191 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 ZNF45Q02386 682 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 ZNF773Q6PK81 442 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 FAM223AQ8IWN6 122 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 HSD17B10Q99714 261 aaKnown RBP11.65□□□□□ -0.54
VTI1A-203ENST00000472892 TM2D3Q9BRN9 247 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 ZMAT4Q9H898 229 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 AKIP1Q9NQ31 210 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 ADAM30Q9UKF2 790 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 MRPS7Q9Y2R9 242 aaKnown RBP11.65□□□□□ -0.54
VTI1A-203ENST00000472892 TNCP24821 2201 aa11.65□□□□□ -0.54
VTI1A-203ENST00000472892 OR2A4O95047 310 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 PRH1P02810 166 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 CLEC2LP0C7M8 214 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 MECP2P51608 486 aaKnown RBP11.64□□□□□ -0.55
VTI1A-203ENST00000472892 ATP5G2Q06055 141 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 RPEL1Q2QD12 228 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 OR2B11Q5JQS5 317 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 MFSD4AQ8N468 514 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 NECAP1Q8NC96 275 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 OR5H6Q8NGV6 325 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 MUC7Q8TAX7 377 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 THAP7Q9BT49 309 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-203ENST00000472892 RNF167Q9H6Y7 350 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 ETV7Q9Y603 341 aa11.64□□□□□ -0.55
VTI1A-203ENST00000472892 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.63□□□□□ -0.55
VTI1A-203ENST00000472892 MXD1Q05195 221 aa11.63□□□□□ -0.55
VTI1A-203ENST00000472892 C10orf55Q5SWW7 151 aa11.63□□□□□ -0.55
VTI1A-203ENST00000472892 ZNF66Q6ZN08 573 aa11.63□□□□□ -0.55
VTI1A-203ENST00000472892 SGPP2Q8IWX5 399 aa11.63□□□□□ -0.55
VTI1A-203ENST00000472892 VKORC1L1Q8N0U8 176 aa11.63□□□□□ -0.55
VTI1A-203ENST00000472892 PUSL1Q8N0Z8 303 aaKnown RBP11.63□□□□□ -0.55
VTI1A-203ENST00000472892 OR4S2Q8NH73 311 aa11.63□□□□□ -0.55
VTI1A-203ENST00000472892 VSTM2AQ8TAG5 236 aa11.63□□□□□ -0.55
VTI1A-203ENST00000472892 SLC25A38Q96DW6 304 aa11.63□□□□□ -0.55
VTI1A-203ENST00000472892 OR2A7Q96R45 310 aa11.63□□□□□ -0.55
VTI1A-203ENST00000472892 SPATA2Q9UM82 520 aa11.63□□□□□ -0.55
VTI1A-203ENST00000472892 DNAH7Q8WXX0 4024 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 TRAV18A0A075B6X5 111 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 A0A0A6YYH2 397 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 A6NJ64 397 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 TEX22C9J3V5 150 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 BMPR1BO00238 502 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 AIREO43918 545 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 KBTBD11O94819 623 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 IL6RP08887 468 aaPredicted RBP11.62□□□□□ -0.55
VTI1A-203ENST00000472892 MSMO1Q15800 293 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 CASC10Q5T4H9 136 aa11.62□□□□□ -0.55
VTI1A-203ENST00000472892 IDNKQ5T6J7 187 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms