RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 OR10J1P30954 320 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 MUC21Q5SSG8 566 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ZNF48Q96MX3 618 aaPredicted RBP11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TUBD1Q9UJT1 453 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PAPPA2Q9BXP8 1791 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 NDUFB4O95168 129 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 IGF2P01344 180 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PDLIM4P50479 330 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ZAR1Q86SH2 424 aa11.44□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RCC1P18754 421 aaPredicted RBP11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 OR5A1Q8NGJ0 315 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PLCH1Q4KWH8 1693 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 FOXI3A8MTJ6 420 aaPredicted RBP11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 FAM214BQ7L5A3 538 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 DUSP15Q9H1R2 295 aaPredicted RBP11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 B4DEV8 164 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 P2RY1P47900 373 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PCOLCEQ15113 449 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PRSS42Q7Z5A4 293 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ELOA3CA0A087WX78 387 aaPredicted RBP11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 SCTP09683 121 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 SPRED2Q7Z698 418 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 C9orf40Q8IXQ3 194 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 SRSF12Q8WXF0 261 aaKnown RBP11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TCF21O43680 179 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 CBLN2Q8IUK8 224 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 M0R381 172 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RUNX1Q01196 453 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TRGV3P03979 118 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 C1orf174Q8IYL3 243 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ABHD12Q8N2K0 398 aa11.43□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PLXND1Q9Y4D7 1925 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 NDUFS5O43920 106 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 MPV17P39210 176 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 C2orf16Q68DN1 1984 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 C1QTNF9BB2RNN3 333 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PNRC1Q12796 327 aaPredicted RBP11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 IBA57Q5T440 356 aaKnown RBP11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 MRPL30Q8TCC3 161 aaKnown RBP11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 JMJD8Q96S16 334 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 H3BQ15 152 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 NAPSAO96009 420 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PQLC2Q6ZP29 291 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ASPDHA6ND91 283 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 SOD3P08294 240 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PNKDQ8N490 385 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ST6GAL2Q96JF0 529 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 MOSPD3O75425 235 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 EFNB2P52799 333 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PAPPA-AS1Q5QFB9 102 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TMEM42Q69YG0 159 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ABLIM2Q6H8Q1 611 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 NFAM1Q8NET5 270 aaPredicted RBP11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 JPT2Q9H910 190 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TMEM160Q9NX00 188 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ATAD5Q96QE3 1844 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ARHGAP21Q5T5U3 1957 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TGFAP01135 160 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 CXCL3P19876 107 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 NPPCP23582 126 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RND2P52198 227 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ZNF506Q5JVG8 444 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 LILRA6Q6PI73 481 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ATG4DQ86TL0 474 aaPredicted RBP11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TNFSF18Q9UNG2 199 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 SELENOKQ9Y6D0 94 aa11.42□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 CALYQ9NYX4 217 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 A0A0J9YW62 118 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 F12P00748 615 aaPredicted RBP11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ATOH7Q8N100 152 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 LSM10Q969L4 123 aaKnown RBP11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 STRCQ7RTU9 1775 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ZNF562Q6V9R5 426 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 C18orf15Q96N68 181 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PRDM6Q9NQX0 595 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 CYSLTR1Q9Y271 337 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 FXYD1O00168 92 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TRGC1P0CF51 173 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 COX14Q96I36 57 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PSG4Q00888 419 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ANXA2RQ3ZCQ2 193 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 SONP18583 2426 aaKnown RBP11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 ANKRD20A5PA0PJZ0 165 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RPL36A-HNRNPH2H7BZ11 118 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RSPO4Q2I0M5 234 aaPredicted RBP11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 GLMPQ8WWB7 406 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RAB24Q969Q5 203 aa11.41□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 MALRD1Q5VYJ5 2156 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PRR33A8MZF0 331 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 OR2H2O95918 312 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 OR4X2Q8NGF9 303 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TMEM174Q8WUU8 243 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 RHOVQ96L33 236 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 SLIRPQ9GZT3 109 aaKnown RBP11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 AHRRA9YTQ3 701 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TMEM250H0YL14 139 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 CDCP2Q5VXM1 449 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 PCSK4Q6UW60 755 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 TMEM106BQ9NUM4 274 aa11.4□□□□□ -0.58
NPHP3-ACAD11-201ENST00000471702 C17orf51A8MQB3 221 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms