RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 CYB561D1Q8N8Q1 229 aa15.35■□□□□ 0.05
COL20A1-205ENST00000471582 CCL13Q99616 98 aa15.35■□□□□ 0.05
COL20A1-205ENST00000471582 IDI2-AS1Q9NZ38 188 aa15.35■□□□□ 0.05
COL20A1-205ENST00000471582 PUS1Q9Y606 427 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL20A1-205ENST00000471582 NBEAQ8NFP9 2946 aa15.35■□□□□ 0.05
COL20A1-205ENST00000471582 SAA2-SAA4A0A096LPE2 208 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 MAP1LC3B2A6NCE7 125 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 NKX6-3A6NJ46 265 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 C15orf62A8K5M9 175 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 H3BQ15 152 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 IFNA17P01571 189 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 SAA2P0DJI9 122 aaPredicted RBP15.34■□□□□ 0.05
COL20A1-205ENST00000471582 THBS3P49746 956 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 LCN15Q6UWW0 184 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 ZNF429Q86V71 674 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 FAM216BQ8N7L0 139 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 DEFB108BQ8NET1 73 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 HIST1H2BAQ96A08 127 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 MAP1LC3BQ9GZQ8 125 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 RAI1Q7Z5J4 1906 aaPredicted RBP15.34■□□□□ 0.05
COL20A1-205ENST00000471582 SPTA1P02549 2419 aa15.34■□□□□ 0.05
COL20A1-205ENST00000471582 IFNA1P01562 189 aa15.33■□□□□ 0.05
COL20A1-205ENST00000471582 FGF7P21781 194 aa15.33■□□□□ 0.05
COL20A1-205ENST00000471582 RAB13P51153 203 aa15.33■□□□□ 0.05
COL20A1-205ENST00000471582 ELLP55199 621 aaPredicted RBP15.33■□□□□ 0.05
COL20A1-205ENST00000471582 OR2B8PP59922 312 aa15.33■□□□□ 0.05
COL20A1-205ENST00000471582 SSX7Q7RTT5 188 aa15.33■□□□□ 0.05
COL20A1-205ENST00000471582 P2RX4Q99571 388 aa15.33■□□□□ 0.05
COL20A1-205ENST00000471582 ZNF251Q9BRH9 671 aa15.33■□□□□ 0.05
COL20A1-205ENST00000471582 DYSFO75923 2080 aa15.33■□□□□ 0.04
COL20A1-205ENST00000471582 VSTM5A8MXK1 200 aa15.33■□□□□ 0.04
COL20A1-205ENST00000471582 IGHV3-7P01780 117 aa15.33■□□□□ 0.04
COL20A1-205ENST00000471582 CCL8P80075 99 aa15.33■□□□□ 0.04
COL20A1-205ENST00000471582 RELBQ01201 579 aa15.33■□□□□ 0.04
COL20A1-205ENST00000471582 SLC35E3Q7Z769 313 aa15.33■□□□□ 0.04
COL20A1-205ENST00000471582 RPP25LQ8N5L8 163 aaKnown RBP15.33■□□□□ 0.04
COL20A1-205ENST00000471582 NIPSNAP3BQ9BS92 247 aa15.33■□□□□ 0.04
COL20A1-205ENST00000471582 NPCDR1Q9BY65 106 aa15.33■□□□□ 0.04
COL20A1-205ENST00000471582 NGBQ9NPG2 151 aa15.33■□□□□ 0.04
COL20A1-205ENST00000471582 TMEM140Q9NV12 185 aa15.33■□□□□ 0.04
COL20A1-205ENST00000471582 RPUSD1Q9UJJ7 312 aaKnown RBP15.33■□□□□ 0.04
COL20A1-205ENST00000471582 LINC00312Q9Y6C7 94 aa15.33■□□□□ 0.04
COL20A1-205ENST00000471582 A0A087WWC5 75 aa15.32■□□□□ 0.04
COL20A1-205ENST00000471582 TRAV38-1A0A0B4J264 116 aa15.32■□□□□ 0.04
COL20A1-205ENST00000471582 hADV38S2A0JD32 116 aa15.32■□□□□ 0.04
COL20A1-205ENST00000471582 TSPAN9O75954 239 aa15.32■□□□□ 0.04
COL20A1-205ENST00000471582 ACSM6Q6P461 480 aa15.32■□□□□ 0.04
COL20A1-205ENST00000471582 C1orf229Q6ZS94 237 aaPredicted RBP15.32■□□□□ 0.04
COL20A1-205ENST00000471582 OR10A7Q8NGE5 316 aa15.32■□□□□ 0.04
COL20A1-205ENST00000471582 LEAP2Q969E1 77 aa15.32■□□□□ 0.04
COL20A1-205ENST00000471582 GGACTQ9BVM4 153 aa15.32■□□□□ 0.04
COL20A1-205ENST00000471582 PKD1L2Q7Z442 2459 aa15.32■□□□□ 0.04
COL20A1-205ENST00000471582 C17orf112F2Z3M2 114 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 SOX15O60248 233 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 IGKV1D-33P01593 117 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 IGKV1-33P01594 117 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 VDAC2P45880 294 aaPredicted RBP15.31■□□□□ 0.04
COL20A1-205ENST00000471582 MRPS11P82912 194 aaKnown RBP15.31■□□□□ 0.04
COL20A1-205ENST00000471582 MEF2CQ06413 473 aaPredicted RBP15.31■□□□□ 0.04
COL20A1-205ENST00000471582 SPINK9Q5DT21 86 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 UTF1Q5T230 341 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 SSX9Q7RTT3 188 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 C1orf87Q8N0U7 546 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 ZNF709Q8N972 641 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 ST6GALNAC3Q8NDV1 305 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 RAB39BQ96DA2 213 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 SLC39A9Q9NUM3 307 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 VAX2Q9UIW0 290 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 CTXND1A0A1B0GTU2 59 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 ZFP92A6NM28 416 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 FBP1P09467 338 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 MAS1LP35410 378 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 CA7P43166 264 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 SLC25A48Q6ZT89 311 aaKnown RBP15.31■□□□□ 0.04
COL20A1-205ENST00000471582 TGIF2LYQ8IUE0 185 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 TVP23CQ96ET8 276 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 DCAF16Q9NXF7 216 aa15.31■□□□□ 0.04
COL20A1-205ENST00000471582 KLF2Q9Y5W3 355 aaPredicted RBP15.31■□□□□ 0.04
COL20A1-205ENST00000471582 HCFC1P51610 2035 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 TMPRSS2O15393 492 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 NDUFA2O43678 99 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 DAOP14920 347 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 TAGLN2P37802 199 aaKnown RBP15.3■□□□□ 0.04
COL20A1-205ENST00000471582 FGF8P55075 233 aaPredicted RBP15.3■□□□□ 0.04
COL20A1-205ENST00000471582 TFF3Q07654 80 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 POU2AF1Q16633 256 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 RBMS3Q6XE24 437 aaKnown RBP15.3■□□□□ 0.04
COL20A1-205ENST00000471582 LYG1Q8N1E2 194 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 LHX4Q969G2 390 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 GAL3ST2Q9H3Q3 398 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 SAP30LQ9HAJ7 183 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 BIN3Q9NQY0 253 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 WDR83OSQ9Y284 106 aa15.3■□□□□ 0.04
COL20A1-205ENST00000471582 C15orf61A6NNL5 157 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 MPDU1O75352 247 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 NDUFS6O75380 124 aaKnown RBP15.29■□□□□ 0.04
COL20A1-205ENST00000471582 CEBPGP53567 150 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 RAB5BP61020 215 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 TLE1Q04724 770 aa15.29■□□□□ 0.04
COL20A1-205ENST00000471582 FAM90A2PQ658T7 463 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms