RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 EGR2P11161 476 aaPredicted RBP11.99□□□□□ -0.49
SDC3-203ENST00000471567 PTBP1P26599 531 aaKnown RBP eCLIP11.99□□□□□ -0.49
SDC3-203ENST00000471567 S100GP29377 79 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 PPIFP30405 207 aaKnown RBP11.99□□□□□ -0.49
SDC3-203ENST00000471567 FXYD3Q14802 87 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 MEF2DQ14814 521 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 AADACL3Q5VUY0 350 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 LHFPL1Q86WI0 220 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 SLC38A6Q8IZM9 456 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 SPAG16Q8N0X2 631 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 POC5Q8NA72 575 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 MINDY2Q8NBR6 621 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 OR4F17Q8NGA8 305 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 VSTM2AQ8TAG5 236 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 OR4F4Q96R69 305 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 RSRP1Q9BUV0 290 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 WSB1Q9Y6I7 421 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 WNK1Q9H4A3 2382 aa11.99□□□□□ -0.49
SDC3-203ENST00000471567 PLXNB1O43157 2135 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 G3V318 75 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 CNIH1O95406 144 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 HPRT1P00492 218 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 SAA1P0DJI8 122 aaPredicted RBP11.98□□□□□ -0.49
SDC3-203ENST00000471567 SLC6A1P30531 599 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 RPL23AP62750 156 aaKnown RBP11.98□□□□□ -0.49
SDC3-203ENST00000471567 PRSS8Q16651 343 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 AKIRIN2Q53H80 203 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 C19orf54Q5BKX5 351 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 CXorf66Q5JRM2 361 aaPredicted RBP11.98□□□□□ -0.49
SDC3-203ENST00000471567 FOXB2Q5VYV0 432 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 CCDC190Q86UF4 302 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 OR51H1Q8NH63 302 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 ABHD5Q8WTS1 349 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 ARPC1AQ92747 370 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 FBXO7Q9Y3I1 522 aa11.98□□□□□ -0.49
SDC3-203ENST00000471567 A0A1W2PRX2 142 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 ARPC1BO15143 372 aaKnown RBP11.97□□□□□ -0.49
SDC3-203ENST00000471567 OR2A4O95047 310 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 IGLV1-40P01703 118 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 AKAIN1P0CW23 69 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 F2RP25116 425 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 PSMB8P28062 276 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 ETV6P41212 452 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 SSBP2P81877 361 aaPredicted RBP11.97□□□□□ -0.49
SDC3-203ENST00000471567 PJVKQ0ZLH3 352 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 MRGPRG-AS1Q2M3A8 158 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 KHDC1LQ5JSQ8 128 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 MMD2Q8IY49 270 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 PUSL1Q8N0Z8 303 aaKnown RBP11.97□□□□□ -0.49
SDC3-203ENST00000471567 OR4D10Q8NGI6 311 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 TERB2Q8NHR7 220 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 FAM110DQ8TAY7 271 aaPredicted RBP11.97□□□□□ -0.49
SDC3-203ENST00000471567 R3HDM4Q96D70 268 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 ZNF486Q96H40 463 aaPredicted RBP11.97□□□□□ -0.49
SDC3-203ENST00000471567 RHOVQ96L33 236 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 TMEM68Q96MH6 324 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 OR2A7Q96R45 310 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 PLEKHA2Q9HB19 425 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 FAM212BQ9NTI7 297 aaPredicted RBP11.97□□□□□ -0.49
SDC3-203ENST00000471567 V9GYH0 126 aa11.97□□□□□ -0.49
SDC3-203ENST00000471567 MGAM2Q2M2H8 2515 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 TRRAPQ9Y4A5 3859 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 ANKRD20A5PA0PJZ0 165 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 DISC1C4P0D8 188 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 RAMP3O60896 148 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 RLN1P04808 185 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 ZNF735P0CB33 412 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 TAS2R31P59538 309 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 GNB1P62873 340 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 POU2AF1Q16633 256 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 ECSCRQ19T08 205 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 PYDC2Q56P42 97 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 SPANXN2Q5MJ10 180 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 TMEM65Q6PI78 240 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 UNQ5815/PRO19632Q6UWF5 114 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 IDO2Q6ZQW0 420 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 OR6Q1Q8NGQ2 317 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 TMEM167AQ8TBQ9 72 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 THAP7Q9BT49 309 aaPredicted RBP11.96□□□□□ -0.49
SDC3-203ENST00000471567 COMMD9Q9P000 198 aa11.96□□□□□ -0.49
SDC3-203ENST00000471567 FOXA2Q9Y261 457 aaPredicted RBP11.96□□□□□ -0.49
SDC3-203ENST00000471567 ACTL6BO94805 426 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 RPLP1P05386 114 aaKnown RBP11.95□□□□□ -0.5
SDC3-203ENST00000471567 PGAM2P15259 253 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 NQO2P16083 231 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 MAS1LP35410 378 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 ECI1P42126 302 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 CDX1P47902 265 aaPredicted RBP11.95□□□□□ -0.5
SDC3-203ENST00000471567 RND3P61587 244 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 TNXAQ16473 311 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 PHLDA2Q53GA4 152 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 VKORC1L1Q8N0U8 176 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 LFNGQ8NES3 379 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 OR5M8Q8NGP6 311 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 OR4A5Q8NH83 315 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 GRPEL2Q8TAA5 225 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 ZFAND1Q8TCF1 268 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 MYOZ3Q8TDC0 251 aa11.95□□□□□ -0.5
SDC3-203ENST00000471567 FAM103A1Q9BTL3 118 aaKnown RBP11.95□□□□□ -0.5
SDC3-203ENST00000471567 ZNF430Q9H8G1 570 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms