RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 ALDH3B2P48448 385 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 VMA21Q3ZAQ7 101 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 C19orf35Q6ZS72 473 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 KCTD9Q7L273 389 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 VKORC1L1Q8N0U8 176 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 GVQW1Q8N7I0 195 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 SRSF12Q8WXF0 261 aaKnown RBP11.76□□□□□ -0.53
COL1A1-203ENST00000471344 ACOT12Q8WYK0 555 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 ADTRPQ96IZ2 230 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 PHB2Q99623 299 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 TINAGL1Q9GZM7 467 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-203ENST00000471344 DCSTAMPQ9H295 470 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
COL1A1-203ENST00000471344 RBMX2Q9Y388 322 aaKnown RBP11.76□□□□□ -0.53
COL1A1-203ENST00000471344 SMAD5-AS1Q9Y6J3 95 aa11.76□□□□□ -0.53
COL1A1-203ENST00000471344 H3BUA1 57 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 CTXN2P0C2S0 81 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 NHLRC4P0CG21 123 aaPredicted RBP11.75□□□□□ -0.53
COL1A1-203ENST00000471344 RRASP10301 218 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 SCAND1P57086 179 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 BRWD1-AS2P59051 145 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 VBP1P61758 197 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 ZNF45Q02386 682 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 EIF4EBP1Q13541 118 aaPredicted RBP11.75□□□□□ -0.53
COL1A1-203ENST00000471344 IDNKQ5T6J7 187 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 SBSPONQ8IVN8 264 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 TEX45Q8NA69 505 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 ADAD2Q8NCV1 583 aaKnown RBP11.75□□□□□ -0.53
COL1A1-203ENST00000471344 RSRP1Q9BUV0 290 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 MRPS26Q9BYN8 205 aaKnown RBP11.75□□□□□ -0.53
COL1A1-203ENST00000471344 ANXA10Q9UJ72 324 aa11.75□□□□□ -0.53
COL1A1-203ENST00000471344 TRAV18A0A075B6X5 111 aa11.74□□□□□ -0.53
COL1A1-203ENST00000471344 SYNJ2BPP57105 145 aa11.74□□□□□ -0.53
COL1A1-203ENST00000471344 CNIH2Q6PI25 160 aa11.74□□□□□ -0.53
COL1A1-203ENST00000471344 IL34Q6ZMJ4 242 aa11.74□□□□□ -0.53
COL1A1-203ENST00000471344 OR6Q1Q8NGQ2 317 aa11.74□□□□□ -0.53
COL1A1-203ENST00000471344 OSR1Q8TAX0 266 aaPredicted RBP11.74□□□□□ -0.53
COL1A1-203ENST00000471344 OR4C12Q96R67 309 aa11.74□□□□□ -0.53
COL1A1-203ENST00000471344 DCUN1D5Q9BTE7 237 aa11.74□□□□□ -0.53
COL1A1-203ENST00000471344 RANGRFQ9HD47 186 aaPredicted RBP11.74□□□□□ -0.53
COL1A1-203ENST00000471344 SPATA2Q9UM82 520 aa11.74□□□□□ -0.53
COL1A1-203ENST00000471344 IGLV1-51P01701 117 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 OR9G9P0C7N8 305 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 FRMD6-AS1P0C7T7 363 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 AADACP22760 399 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 KLF5Q13887 457 aaPredicted RBP11.73□□□□□ -0.53
COL1A1-203ENST00000471344 CDK10Q15131 360 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 CTF1Q16619 201 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 GPR107Q5VW38 600 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 ZNF343Q6P1L6 599 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 DYNC2H1Q8NCM8 4307 aaKnown RBP11.73□□□□□ -0.53
COL1A1-203ENST00000471344 TCTEX1D2Q8WW35 142 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 TMEM68Q96MH6 324 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 TAS2R8Q9NYW2 309 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 ETV7Q9Y603 341 aa11.73□□□□□ -0.53
COL1A1-203ENST00000471344 A0A0G2JLM5 398 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 A0A1B0GW64 132 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 MEIS3P1A6NDR6 274 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 HMX3A6NHT5 357 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 E7EUB6 86 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 MPPED1O15442 326 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 TNFSF12O43508 249 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 TMEM127O75204 238 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 SLC22A5O76082 557 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 BRI3O95415 125 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 MYOD1P15172 320 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 ZP3P21754 424 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 RHOGP84095 191 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 TIMM50Q3ZCQ8 353 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 BEST4Q8NFU0 473 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 SNAPC3Q92966 411 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 AKIP1Q9NQ31 210 aa11.72□□□□□ -0.53
COL1A1-203ENST00000471344 PEF1Q9UBV8 284 aaKnown RBP11.72□□□□□ -0.53
COL1A1-203ENST00000471344 A0A0A6YYH2 397 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 A6NJ64 397 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 TEX22C9J3V5 150 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 GABARAPO95166 117 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 ARPC4P59998 168 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 ANKRD13BQ86YJ7 626 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 Q8N1Y9 231 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 OR9G4Q8NGQ1 327 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 SECTM1Q8WVN6 248 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 ELOVL1Q9BW60 279 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 CCL28Q9NRJ3 127 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 PRELID3BQ9Y3B1 194 aa11.71□□□□□ -0.53
COL1A1-203ENST00000471344 BMPR1BO00238 502 aa11.7□□□□□ -0.54
COL1A1-203ENST00000471344 FCGR2CP31995 323 aa11.7□□□□□ -0.54
COL1A1-203ENST00000471344 EXOSC2Q13868 293 aaKnown RBP11.7□□□□□ -0.54
COL1A1-203ENST00000471344 SSX9Q7RTT3 188 aa11.7□□□□□ -0.54
COL1A1-203ENST00000471344 HOGA1Q86XE5 327 aa11.7□□□□□ -0.54
COL1A1-203ENST00000471344 MMD2Q8IY49 270 aa11.7□□□□□ -0.54
COL1A1-203ENST00000471344 MFSD4AQ8N468 514 aa11.7□□□□□ -0.54
COL1A1-203ENST00000471344 OR4S2Q8NH73 311 aa11.7□□□□□ -0.54
COL1A1-203ENST00000471344 USMG5Q96IX5 58 aa11.7□□□□□ -0.54
COL1A1-203ENST00000471344 HSD17B10Q99714 261 aaKnown RBP11.7□□□□□ -0.54
COL1A1-203ENST00000471344 AUNIPQ9H7T9 357 aa11.7□□□□□ -0.54
COL1A1-203ENST00000471344 MRPS7Q9Y2R9 242 aaKnown RBP11.7□□□□□ -0.54
COL1A1-203ENST00000471344 TRBV9A0A0B4J1U6 114 aa11.69□□□□□ -0.54
COL1A1-203ENST00000471344 IZUMO1RA6ND01 250 aa11.69□□□□□ -0.54
COL1A1-203ENST00000471344 OR2J3O76001 311 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms