RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 PHLDA2Q53GA4 152 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 ARSJQ5FYB0 599 aaPredicted RBP10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 FAAP20Q6NZ36 180 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 MZT2BQ6NZ67 158 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 SLC35E3Q7Z769 313 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 OR51H1Q8NH63 302 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 SPATA3Q8NHX4 192 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 MRGPRFQ96AM1 343 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 RHOVQ96L33 236 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 TMEM68Q96MH6 324 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 RTBDNQ9BSG5 229 aaPredicted RBP10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 METTL1Q9UBP6 276 aaKnown RBP10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 SIGLEC9Q9Y336 463 aa10.02□□□□□ -0.81
SPTLC1-204ENST00000469778 UPK1BO75841 260 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 OR2A4O95047 310 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 IGLV2-23P01705 113 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 IGF1P05019 195 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 CRYGBP07316 175 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 MAS1LP35410 378 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 VDAC2P45880 294 aaPredicted RBP10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 PROK1P58294 105 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 UBE2MP61081 183 aaKnown RBP10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 ERVK-16P61578 105 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 AWAT1Q58HT5 328 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 C12orf54Q6X4T0 127 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 SGPP2Q8IWX5 399 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 MMD2Q8IY49 270 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 COMMD1Q8N668 190 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 CHPT1Q8WUD6 406 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 OR2A7Q96R45 310 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 WNT10AQ9GZT5 417 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 C5orf66Q9H5L9 145 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 SERTAD4Q9NUC0 356 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 BET1LQ9NYM9 111 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 COL6A5A8TX70 2615 aa10.01□□□□□ -0.81
SPTLC1-204ENST00000469778 FBN1P35555 2871 aaKnown RBP10□□□□□ -0.81
SPTLC1-204ENST00000469778 TEX13DA0A0J9YY54 714 aaPredicted RBP10□□□□□ -0.81
SPTLC1-204ENST00000469778 C3orf85A0A1B0GTC6 90 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 CRYM-AS1A6NIL9 109 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 SRRM4A7MD48 611 aaKnown RBP10□□□□□ -0.81
SPTLC1-204ENST00000469778 LYRM1O43325 122 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 SLC25A17O43808 307 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 RAMP3O60896 148 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 ACTL6BO94805 426 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 NDUFB6O95139 128 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 ANXA3P12429 323 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 DEFA1P59665 94 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 DEFA3P59666 94 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 SLC35B1P78383 322 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 SRPXP78539 464 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 TMEM267Q0VDI3 215 aaPredicted RBP10□□□□□ -0.81
SPTLC1-204ENST00000469778 ASAH1Q13510 395 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 FBLN7Q53RD9 439 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 TMEM128Q5BJH2 165 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 C9orf152Q5JTZ5 239 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 C3orf56Q8N813 242 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 TMEM167AQ8TBQ9 72 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 GALNT14Q96FL9 552 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 OR51J1Q9H342 316 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 FBXL15Q9H469 300 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 CACFD1Q9UGQ2 172 aa10□□□□□ -0.81
SPTLC1-204ENST00000469778 PLA2G10O15496 165 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 PI3P19957 117 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 MDKP21741 143 aaPredicted RBP9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 UCP1P25874 307 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 LPAR6P43657 344 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 CX3CL1P78423 397 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 PRSS8Q16651 343 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 ZNF585BQ52M93 769 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 OR2B11Q5JQS5 317 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 CENPVQ7Z7K6 275 aaPredicted RBP9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 PUSL1Q8N0Z8 303 aaKnown RBP9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 IL22RA2Q969J5 263 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 TSC22D3Q99576 134 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 MDFIQ99750 246 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 ZNF747Q9BV97 191 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 TMEM222Q9H0R3 208 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 ALX4Q9H161 411 aaPredicted RBP9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 NAA60Q9H7X0 242 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 FKBP11Q9NYL4 201 aa9.99□□□□□ -0.81
SPTLC1-204ENST00000469778 IGHV7-81A0A0B4J1V7 117 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 MARCH11A6NNE9 402 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 KBTBD11O94819 623 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 CNIH1O95406 144 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 CDS2O95674 445 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 IL6RP08887 468 aaPredicted RBP9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 SAA1P0DJI8 122 aaPredicted RBP9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 VSIG10L2P0DP72 767 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 CNTFRP26992 372 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 SLC6A1P30531 599 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 CRIP2P52943 208 aaPredicted RBP9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 AKIRIN2Q53H80 203 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 SHISA2Q6UWI4 295 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 FAM219AQ8IW50 185 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 CENPSQ8N2Z9 138 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 DMBX1Q8NFW5 382 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 R3HDM4Q96D70 268 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 GPHA2Q96T91 129 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 VSIG4Q9Y279 399 aa9.98□□□□□ -0.81
SPTLC1-204ENST00000469778 LINC00854A0A1B0GVQ3 168 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms