RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 TMEM268Q5VZI3 342 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 LYZL2Q7Z4W2 148 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 SLC35G3Q8N808 338 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 DRAXINQ8NBI3 349 aaPredicted RBP6.55□□□□□ -1.36
NPHP3-204ENST00000469232 PIFOQ8TCI5 191 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 CASTOR1Q8WTX7 329 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 C17orf50Q8WW18 174 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 ST6GAL2Q96JF0 529 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 MRPL18Q9H0U6 180 aaKnown RBP6.55□□□□□ -1.36
NPHP3-204ENST00000469232 SLC35D1Q9NTN3 355 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 MGAT4CQ9UBM8 478 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 WASHC3Q9Y3C0 194 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 MMP24Q9Y5R2 645 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 ACANP16112 2415 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 HIVEP1P15822 2718 aa6.55□□□□□ -1.36
NPHP3-204ENST00000469232 A0A1B0GU03 582 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 SRRM4A7MD48 611 aaKnown RBP6.54□□□□□ -1.36
NPHP3-204ENST00000469232 A8MV72 311 aaPredicted RBP6.54□□□□□ -1.36
NPHP3-204ENST00000469232 G3V3Q6 166 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 TIMM23O14925 209 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 FCGR3BO75015 233 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 ATG12O94817 140 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 SPDEFO95238 335 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 APOA2P02652 100 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 IGKV1-16P04430 117 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 LGALS4P56470 323 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 MRGPRG-AS1Q2M3A8 158 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 PDLIM3Q53GG5 364 aaPredicted RBP6.54□□□□□ -1.36
NPHP3-204ENST00000469232 GGNBP1Q5YKI7 109 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 TCTE3Q8IZS6 198 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 PUSL1Q8N0Z8 303 aaKnown RBP6.54□□□□□ -1.36
NPHP3-204ENST00000469232 OR4C13Q8NGP0 309 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 NANPQ8TBE9 248 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 AIFM2Q9BRQ8 373 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 PRR13Q9NZ81 148 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 NUP50Q9UKX7 468 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 A0A0G2JRQ6 117 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 SSNA1O43805 119 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 ADAP1O75689 374 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 NDUFA3O95167 84 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 NQO2P16083 231 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 REG1BP48304 166 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 UBE2KP61086 200 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 Q6ZRM9 215 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 ZNF695Q8IW36 515 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 FOXRED2Q8IWF2 684 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 NPBQ8NG41 125 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 OR4D5Q8NGN0 318 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 R3HDM4Q96D70 268 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 OR10C1Q96KK4 312 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 RHOVQ96L33 236 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 C2orf50Q96LR7 162 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 FYTTD1Q96QD9 318 aaKnown RBP6.54□□□□□ -1.36
NPHP3-204ENST00000469232 NMES1Q9C002 83 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 ZNF436Q9C0F3 470 aaPredicted RBP6.54□□□□□ -1.36
NPHP3-204ENST00000469232 PLSCR3Q9NRY6 295 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 BET1LQ9NYM9 111 aa6.54□□□□□ -1.36
NPHP3-204ENST00000469232 TLN2Q9Y4G6 2542 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 NAV3Q8IVL0 2385 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 A0A0U1RQK1 487 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 MARCH11A6NNE9 402 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 MPTX1A8MV57 137 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 F8W735 103 aaPredicted RBP6.53□□□□□ -1.36
NPHP3-204ENST00000469232 CRYZL1O95825 349 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 HRASP01112 189 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 RAP2BP61225 183 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 CYCSP99999 105 aaKnown RBP6.53□□□□□ -1.36
NPHP3-204ENST00000469232 ID3Q02535 119 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 SSX2Q16385 188 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 RUSC1-AS1Q66K80 236 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 LIN54Q6MZP7 749 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 ZNF429Q86V71 674 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 TEX45Q8NA69 505 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 OR8H1Q8NGG4 311 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 OR4A5Q8NH83 315 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 GPR146Q96CH1 333 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 FLYWCH2Q96CP2 140 aaKnown RBP6.53□□□□□ -1.36
NPHP3-204ENST00000469232 EAF1Q96JC9 268 aaPredicted RBP6.53□□□□□ -1.36
NPHP3-204ENST00000469232 SPIN2AQ99865 258 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 SPIN2BQ9BPZ2 258 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 MS4A7Q9GZW8 240 aaPredicted RBP6.53□□□□□ -1.36
NPHP3-204ENST00000469232 C11orf1Q9H5F2 150 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 HILPDAQ9Y5L2 63 aa6.53□□□□□ -1.36
NPHP3-204ENST00000469232 hCG_2014768A0A024R1R8 64 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 FAM90A26D6RGX4 464 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 GOSR2O14653 212 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 MOSP00540 346 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 IFNA21P01568 189 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 HOXB5P09067 269 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 FBP1P09467 338 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 LYL1P12980 280 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 BRS3P32247 399 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 FBLN7Q53RD9 439 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 OR2B11Q5JQS5 317 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 OR4A47Q6IF82 309 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 GSG1LQ6UXU4 331 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 BRD3OSQ6XYD6 125 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 MOB3BQ86TA1 216 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 PDZD9Q8IXQ8 264 aa6.52□□□□□ -1.37
NPHP3-204ENST00000469232 ZBTB8BQ8NAP8 495 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms