RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 SLC35D1Q9NTN3 355 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 KIAA1456Q9P272 454 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 TBC1D28Q2M2D7 210 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 APOBEC3DQ96AK3 386 aaPredicted RBP10.45□□□□□ -0.74
USP11-206ENST00000469080 RYDENQ9NUL5 291 aaKnown RBP10.45□□□□□ -0.74
USP11-206ENST00000469080 TLN2Q9Y4G6 2542 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 CPAMD8Q8IZJ3 1885 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 IGHV3OR15-7A0A075B7D8 119 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 SERPINE2P07093 398 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 CYC1P08574 325 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 CSRP1P21291 193 aaKnown RBP10.45□□□□□ -0.74
USP11-206ENST00000469080 GCH1P30793 250 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 GTSF1LQ9H1H1 148 aa10.45□□□□□ -0.74
USP11-206ENST00000469080 HSPB1P04792 205 aaKnown RBP10.44□□□□□ -0.74
USP11-206ENST00000469080 P2RY1P47900 373 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 RAB9AP51151 201 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 ARF6P62330 175 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 GNMTQ14749 295 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 SHISA2Q6UWI4 295 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 CISD2Q8N5K1 135 aaKnown RBP10.44□□□□□ -0.74
USP11-206ENST00000469080 OR2Z1Q8NG97 314 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 OR4B1Q8NGF8 309 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 SPSB1Q96BD6 273 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 GPR146Q96CH1 333 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 C1orf147Q96MC9 270 aaPredicted RBP10.44□□□□□ -0.74
USP11-206ENST00000469080 SLC45A2Q9UMX9 530 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 TRAPPC1Q9Y5R8 145 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 PROB1E7EW31 1015 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 PDCD6O75340 191 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 LYL1P12980 280 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 LGALS7P47929 136 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 PDLIM4P50479 330 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 FAM3BP58499 235 aaPredicted RBP10.44□□□□□ -0.74
USP11-206ENST00000469080 ATOH7Q8N100 152 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 NANOS1Q8WY41 292 aaKnown RBP10.44□□□□□ -0.74
USP11-206ENST00000469080 C1orf123Q9NWV4 160 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 GPR132Q9UNW8 380 aa10.44□□□□□ -0.74
USP11-206ENST00000469080 TNRC6AQ8NDV7 1962 aaKnown RBP10.44□□□□□ -0.74
USP11-206ENST00000469080 DIRC3C9JPN6 131 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 HMGB3O15347 200 aaKnown RBP10.43□□□□□ -0.74
USP11-206ENST00000469080 HYPMO75409 117 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 QRFPP83859 136 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 RTP5Q14D33 572 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 HIST3H3Q16695 136 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 TMEM230Q96A57 120 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 MANBALQ9NQG1 85 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 MTCH1Q9NZJ7 389 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 SETD2Q9BYW2 2564 aaPredicted RBP10.43□□□□□ -0.74
USP11-206ENST00000469080 K7N7A8 449 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 PPP1CBP62140 327 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 PNRC1Q12796 327 aaPredicted RBP10.43□□□□□ -0.74
USP11-206ENST00000469080 PRAMEF5Q5TYX0 476 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 HOGA1Q86XE5 327 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 GAPTQ8N292 157 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 OR1K1Q8NGR3 316 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 Q96M66 194 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 LIME1Q9H400 295 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 PTPN13Q12923 2485 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 hCG_38984A0A1B0GV85 526 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 CLEC18AA5D8T8 446 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 FAM24AA6NFZ4 105 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 NPIPB13A6NJU9 1138 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 NPIPB4C9JG80 1138 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 ZNF133P52736 654 aaPredicted RBP10.43□□□□□ -0.74
USP11-206ENST00000469080 LINC00205P59089 165 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 TAS2R30P59541 319 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 ZNF816Q0VGE8 651 aaPredicted RBP10.43□□□□□ -0.74
USP11-206ENST00000469080 EIF3IQ13347 325 aaKnown RBP10.43□□□□□ -0.74
USP11-206ENST00000469080 CLEC18CQ8NCF0 446 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 SARAFQ96BY9 339 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 ZC2HC1AQ96GY0 325 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 RTBDNQ9BSG5 229 aaPredicted RBP10.43□□□□□ -0.74
USP11-206ENST00000469080 DCTN5Q9BTE1 182 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 MALRD1Q5VYJ5 2156 aa10.43□□□□□ -0.74
USP11-206ENST00000469080 OR2T8A6NH00 312 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 OR5B21A6NL26 309 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 UCP1P25874 307 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 PAX2Q02962 417 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 AESQ08117 197 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 ZADH2Q8N4Q0 377 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 OR5AU1Q8NGC0 362 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 OR52M1Q8NGK5 317 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 OR2T10Q8NGZ9 312 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 PARLQ9H300 379 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 NSG2Q9Y328 171 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 LRBAP50851 2863 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 PRB3Q04118 309 aaPredicted RBP10.42□□□□□ -0.74
USP11-206ENST00000469080 SPSB3Q6PJ21 355 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 TMEM144Q7Z5S9 345 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 FAM58AQ8N1B3 248 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 A0A0U1RQK1 487 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 K7EM74 188 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 KRASP01116 189 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 CRYGSP22914 178 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 RBM11P57052 281 aaKnown RBP10.42□□□□□ -0.74
USP11-206ENST00000469080 SCAND1P57086 179 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 OR8I2Q8N0Y5 310 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 SFRP2Q96HF1 295 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 ATP6V0BQ99437 205 aa10.42□□□□□ -0.74
USP11-206ENST00000469080 WNT10AQ9GZT5 417 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms