RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 ZNF430Q9H8G1 570 aaPredicted RBP16.69■□□□□ 0.26
TTC28-204ENST00000468807 MRPS7Q9Y2R9 242 aaKnown RBP16.69■□□□□ 0.26
TTC28-204ENST00000468807 CREBL2O60519 120 aaPredicted RBP16.68■□□□□ 0.26
TTC28-204ENST00000468807 TRBV12-3P01733 135 aa16.68■□□□□ 0.26
TTC28-204ENST00000468807 HLA-DQB1P01920 261 aa16.68■□□□□ 0.26
TTC28-204ENST00000468807 CLEC2LP0C7M8 214 aa16.68■□□□□ 0.26
TTC28-204ENST00000468807 OR9G9P0C7N8 305 aa16.68■□□□□ 0.26
TTC28-204ENST00000468807 DYRK1AQ13627 763 aa16.68■□□□□ 0.26
TTC28-204ENST00000468807 NEDD8Q15843 81 aa16.68■□□□□ 0.26
TTC28-204ENST00000468807 IDNKQ5T6J7 187 aa16.68■□□□□ 0.26
TTC28-204ENST00000468807 ADAD2Q8NCV1 583 aaKnown RBP16.68■□□□□ 0.26
TTC28-204ENST00000468807 TCTEX1D2Q8WW35 142 aa16.68■□□□□ 0.26
TTC28-204ENST00000468807 USMG5Q96IX5 58 aa16.68■□□□□ 0.26
TTC28-204ENST00000468807 ANXA10Q9UJ72 324 aa16.68■□□□□ 0.26
TTC28-204ENST00000468807 SPATA2Q9UM82 520 aa16.68■□□□□ 0.26
TTC28-204ENST00000468807 RBMX2Q9Y388 322 aaKnown RBP16.68■□□□□ 0.26
TTC28-204ENST00000468807 IGKV1D-13A0A0B4J2D9 117 aa16.67■□□□□ 0.26
TTC28-204ENST00000468807 SSX5O60225 188 aa16.67■□□□□ 0.26
TTC28-204ENST00000468807 SLC22A5O76082 557 aa16.67■□□□□ 0.26
TTC28-204ENST00000468807 PRH1P02810 166 aa16.67■□□□□ 0.26
TTC28-204ENST00000468807 IGKV1-13P0DP09 117 aa16.67■□□□□ 0.26
TTC28-204ENST00000468807 ARPC4P59998 168 aa16.67■□□□□ 0.26
TTC28-204ENST00000468807 RPL30P62888 115 aaKnown RBP16.67■□□□□ 0.26
TTC28-204ENST00000468807 KLF5Q13887 457 aaPredicted RBP16.67■□□□□ 0.26
TTC28-204ENST00000468807 CDK10Q15131 360 aa16.67■□□□□ 0.26
TTC28-204ENST00000468807 VKORC1L1Q8N0U8 176 aa16.67■□□□□ 0.26
TTC28-204ENST00000468807 OR9G4Q8NGQ1 327 aa16.67■□□□□ 0.26
TTC28-204ENST00000468807 RCHY1Q96PM5 261 aa16.67■□□□□ 0.26
TTC28-204ENST00000468807 ADAM30Q9UKF2 790 aa16.67■□□□□ 0.26
TTC28-204ENST00000468807 BRI3O95415 125 aa16.66■□□□□ 0.26
TTC28-204ENST00000468807 IGLV1-51P01701 117 aa16.66■□□□□ 0.26
TTC28-204ENST00000468807 RPEL1Q2QD12 228 aa16.66■□□□□ 0.26
TTC28-204ENST00000468807 C10orf55Q5SWW7 151 aa16.66■□□□□ 0.26
TTC28-204ENST00000468807 ZNF343Q6P1L6 599 aa16.66■□□□□ 0.26
TTC28-204ENST00000468807 MMD2Q8IY49 270 aa16.66■□□□□ 0.26
TTC28-204ENST00000468807 OR5H6Q8NGV6 325 aa16.66■□□□□ 0.26
TTC28-204ENST00000468807 TAS2R8Q9NYW2 309 aa16.66■□□□□ 0.26
TTC28-204ENST00000468807 TRAV18A0A075B6X5 111 aa16.65■□□□□ 0.26
TTC28-204ENST00000468807 RBMXL2O75526 392 aaKnown RBP16.65■□□□□ 0.26
TTC28-204ENST00000468807 IGLV2-14P01704 120 aa16.65■□□□□ 0.26
TTC28-204ENST00000468807 RHOGP84095 191 aa16.65■□□□□ 0.26
TTC28-204ENST00000468807 TATDN3Q17R31 274 aa16.65■□□□□ 0.26
TTC28-204ENST00000468807 OR4S2Q8NH73 311 aa16.65■□□□□ 0.26
TTC28-204ENST00000468807 SPIN2AQ99865 258 aa16.65■□□□□ 0.26
TTC28-204ENST00000468807 SPIN2BQ9BPZ2 258 aa16.65■□□□□ 0.26
TTC28-204ENST00000468807 ZMAT4Q9H898 229 aa16.65■□□□□ 0.26
TTC28-204ENST00000468807 FCER2P06734 321 aa16.64■□□□□ 0.25
TTC28-204ENST00000468807 SGPP2Q8IWX5 399 aa16.64■□□□□ 0.25
TTC28-204ENST00000468807 SNAPC3Q92966 411 aa16.64■□□□□ 0.25
TTC28-204ENST00000468807 GPHA2Q96T91 129 aa16.64■□□□□ 0.25
TTC28-204ENST00000468807 HSD17B10Q99714 261 aaKnown RBP16.64■□□□□ 0.25
TTC28-204ENST00000468807 AKIP1Q9NQ31 210 aa16.64■□□□□ 0.25
TTC28-204ENST00000468807 ETV7Q9Y603 341 aa16.64■□□□□ 0.25
TTC28-204ENST00000468807 TNFSF12O43508 249 aa16.63■□□□□ 0.25
TTC28-204ENST00000468807 IGHV4-30-4P0DP06 118 aa16.63■□□□□ 0.25
TTC28-204ENST00000468807 PTHLHP12272 177 aa16.63■□□□□ 0.25
TTC28-204ENST00000468807 ATP5G2Q06055 141 aa16.63■□□□□ 0.25
TTC28-204ENST00000468807 EXOSC2Q13868 293 aaKnown RBP16.63■□□□□ 0.25
TTC28-204ENST00000468807 GVQW1Q8N7I0 195 aa16.63■□□□□ 0.25
TTC28-204ENST00000468807 BEST4Q8NFU0 473 aa16.63■□□□□ 0.25
TTC28-204ENST00000468807 SECTM1Q8WVN6 248 aa16.63■□□□□ 0.25
TTC28-204ENST00000468807 SLC25A38Q96DW6 304 aa16.63■□□□□ 0.25
TTC28-204ENST00000468807 FAM223BA6NKX1 122 aa16.62■□□□□ 0.25
TTC28-204ENST00000468807 H0Y980 276 aa16.62■□□□□ 0.25
TTC28-204ENST00000468807 OR2A4O95047 310 aa16.62■□□□□ 0.25
TTC28-204ENST00000468807 FCGR2CP31995 323 aa16.62■□□□□ 0.25
TTC28-204ENST00000468807 ZNF45Q02386 682 aa16.62■□□□□ 0.25
TTC28-204ENST00000468807 FAM223AQ8IWN6 122 aa16.62■□□□□ 0.25
TTC28-204ENST00000468807 MFSD4AQ8N468 514 aa16.62■□□□□ 0.25
TTC28-204ENST00000468807 VSTM2AQ8TAG5 236 aa16.62■□□□□ 0.25
TTC28-204ENST00000468807 FYTTD1Q96QD9 318 aaKnown RBP16.62■□□□□ 0.25
TTC28-204ENST00000468807 OR2A7Q96R45 310 aa16.62■□□□□ 0.25
TTC28-204ENST00000468807 DPPA5A6NC42 116 aa16.61■□□□□ 0.25
TTC28-204ENST00000468807 HMX3A6NHT5 357 aa16.61■□□□□ 0.25
TTC28-204ENST00000468807 OR2J3O76001 311 aa16.61■□□□□ 0.25
TTC28-204ENST00000468807 KBTBD11O94819 623 aa16.61■□□□□ 0.25
TTC28-204ENST00000468807 SCAND1P57086 179 aa16.61■□□□□ 0.25
TTC28-204ENST00000468807 IL34Q6ZMJ4 242 aa16.61■□□□□ 0.25
TTC28-204ENST00000468807 SSX9Q7RTT3 188 aa16.61■□□□□ 0.25
TTC28-204ENST00000468807 SLC25A42Q86VD7 318 aa16.61■□□□□ 0.25
TTC28-204ENST00000468807 Q8N1Y9 231 aa16.61■□□□□ 0.25
TTC28-204ENST00000468807 CSN3P07498 182 aa16.6■□□□□ 0.25
TTC28-204ENST00000468807 RPL27AP46776 148 aaKnown RBP16.6■□□□□ 0.25
TTC28-204ENST00000468807 ZNF66Q6ZN08 573 aa16.6■□□□□ 0.25
TTC28-204ENST00000468807 HOGA1Q86XE5 327 aa16.6■□□□□ 0.25
TTC28-204ENST00000468807 TTC9CQ8N5M4 171 aa16.6■□□□□ 0.25
TTC28-204ENST00000468807 OR13F1Q8NGS4 319 aa16.6■□□□□ 0.25
TTC28-204ENST00000468807 DIABLOQ9NR28 239 aa16.6■□□□□ 0.25
TTC28-204ENST00000468807 CCL28Q9NRJ3 127 aa16.6■□□□□ 0.25
TTC28-204ENST00000468807 PEMTQ9UBM1 199 aa16.6■□□□□ 0.25
TTC28-204ENST00000468807 C3orf84H3BNL1 204 aa16.59■□□□□ 0.25
TTC28-204ENST00000468807 BMPR1BO00238 502 aa16.59■□□□□ 0.25
TTC28-204ENST00000468807 FXYD4P59646 89 aa16.59■□□□□ 0.25
TTC28-204ENST00000468807 EIF4EBP1Q13541 118 aaPredicted RBP16.59■□□□□ 0.25
TTC28-204ENST00000468807 C15orf32Q32M92 178 aa16.59■□□□□ 0.25
TTC28-204ENST00000468807 LCN12Q6JVE5 192 aa16.59■□□□□ 0.25
TTC28-204ENST00000468807 C19orf35Q6ZS72 473 aa16.59■□□□□ 0.25
TTC28-204ENST00000468807 NECAP1Q8NC96 275 aa16.59■□□□□ 0.25
TTC28-204ENST00000468807 A0A0A6YYH2 397 aa16.58■□□□□ 0.24
TTC28-204ENST00000468807 TRBV9A0A0B4J1U6 114 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms