RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 RAB9AP51151 201 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 BRWD1-AS2P59051 145 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 RPL30P62888 115 aaKnown RBP8.67□□□□□ -1.02
COL4A6-205ENST00000468338 RUNX1Q01196 453 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 FHL3Q13643 280 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 PLGLAQ15195 96 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 RTL8BQ17RB0 113 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 OR2C3Q8N628 320 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 ZNF491Q8N8L2 437 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 OSR1Q8TAX0 266 aaPredicted RBP8.67□□□□□ -1.02
COL4A6-205ENST00000468338 C4orf3Q8WVX3 66 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 ACOT12Q8WYK0 555 aa8.67□□□□□ -1.02
COL4A6-205ENST00000468338 MRPS26Q9BYN8 205 aaKnown RBP8.67□□□□□ -1.02
COL4A6-205ENST00000468338 NAA50Q9GZZ1 169 aaKnown RBP8.67□□□□□ -1.02
COL4A6-205ENST00000468338 I3L521 148 aa8.66□□□□□ -1.02
COL4A6-205ENST00000468338 EIF4EP06730 217 aaKnown RBP8.66□□□□□ -1.02
COL4A6-205ENST00000468338 TAS2R20P59543 309 aa8.66□□□□□ -1.02
COL4A6-205ENST00000468338 UBE2KP61086 200 aa8.66□□□□□ -1.02
COL4A6-205ENST00000468338 TMEM267Q0VDI3 215 aaPredicted RBP8.66□□□□□ -1.02
COL4A6-205ENST00000468338 PJVKQ0ZLH3 352 aa8.66□□□□□ -1.02
COL4A6-205ENST00000468338 TEX45Q8NA69 505 aa8.66□□□□□ -1.02
COL4A6-205ENST00000468338 OR5AP2Q8NGF4 316 aa8.66□□□□□ -1.02
COL4A6-205ENST00000468338 GIMAP1Q8WWP7 306 aa8.66□□□□□ -1.02
COL4A6-205ENST00000468338 HARBI1Q96MB7 349 aa8.66□□□□□ -1.02
COL4A6-205ENST00000468338 NECAP2Q9NVZ3 263 aa8.66□□□□□ -1.02
COL4A6-205ENST00000468338 FOXA2Q9Y261 457 aaPredicted RBP8.66□□□□□ -1.02
COL4A6-205ENST00000468338 J3QRK9 145 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 BRI3O95415 125 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 CRYZL1O95825 349 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 PPYP01298 95 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 AADACP22760 399 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 FCGR2CP31995 323 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 RORCP51449 518 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 ARPC4P59998 168 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 EGFEM1PQ0D2K5 195 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 FXYD3Q14802 87 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 ECSCRQ19T08 205 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 ACTBL2Q562R1 376 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 TMEM69Q5SWH9 247 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 DHRS11Q6UWP2 260 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 ZNF66Q6ZN08 573 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 LFNGQ8NES3 379 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 OR5M8Q8NGP6 311 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 GPX8Q8TED1 209 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 ARPC1AQ92747 370 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 CLCC1Q96S66 551 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 HSD17B10Q99714 261 aaKnown RBP8.65□□□□□ -1.02
COL4A6-205ENST00000468338 FAM103A1Q9BTL3 118 aaKnown RBP8.65□□□□□ -1.02
COL4A6-205ENST00000468338 GNB4Q9HAV0 340 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 COMMD3Q9UBI1 195 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 PLA2G2DQ9UNK4 145 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 VSIG4Q9Y279 399 aa8.65□□□□□ -1.02
COL4A6-205ENST00000468338 A0A1W2PN81 502 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 PRSS3P35030 304 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 CHRNA7P36544 502 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 SRSF3P84103 164 aaKnown RBP8.64□□□□□ -1.03
COL4A6-205ENST00000468338 CBX3Q13185 183 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 CDK10Q15131 360 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 PRSS8Q16651 343 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 DEFB136Q30KP8 78 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 ASPHD1Q5U4P2 390 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 GPR107Q5VW38 600 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 PYHIN1Q6K0P9 492 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 TMEM65Q6PI78 240 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 UNQ5815/PRO19632Q6UWF5 114 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 KCTD9Q7L273 389 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 TMEM68Q96MH6 324 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 DUX3Q96PT4 197 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 MCRIP2Q9BUT9 160 aaKnown RBP8.64□□□□□ -1.03
COL4A6-205ENST00000468338 WDR12Q9GZL7 423 aaKnown RBP8.64□□□□□ -1.03
COL4A6-205ENST00000468338 CCL28Q9NRJ3 127 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 PRELID3BQ9Y3B1 194 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 TGP01266 2768 aa8.64□□□□□ -1.03
COL4A6-205ENST00000468338 MEIS3P1A6NDR6 274 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 H3BUA1 57 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 HPGDSO60760 199 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 FCGR3BO75015 233 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 TPPPO94811 219 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 FCER2P06734 321 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 ZNF182P17025 639 aaPredicted RBP8.63□□□□□ -1.03
COL4A6-205ENST00000468338 ELK1P19419 428 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 DYRK1AQ13627 763 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 VMA21Q3ZAQ7 101 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 FAM209BQ5JX69 171 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 GPR141Q7Z602 305 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 OR11H1Q8NG94 326 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 GPR61Q9BZJ8 451 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 SLA2Q9H6Q3 261 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 SCPEP1Q9HB40 452 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 MRPS7Q9Y2R9 242 aaKnown RBP8.63□□□□□ -1.03
COL4A6-205ENST00000468338 A3GALT2U3KPV4 340 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 SORL1Q92673 2214 aa8.63□□□□□ -1.03
COL4A6-205ENST00000468338 SMIM31A0A1B0GVY4 71 aa8.62□□□□□ -1.03
COL4A6-205ENST00000468338 SULT1C2O00338 296 aa8.62□□□□□ -1.03
COL4A6-205ENST00000468338 RBFOX2O43251 390 aaKnown RBP eCLIP8.62□□□□□ -1.03
COL4A6-205ENST00000468338 PRB2P02812 416 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-205ENST00000468338 SAA1P0DJI8 122 aaPredicted RBP8.62□□□□□ -1.03
COL4A6-205ENST00000468338 GNRHRP30968 328 aa8.62□□□□□ -1.03
COL4A6-205ENST00000468338 RFX2P48378 723 aa8.62□□□□□ -1.03
COL4A6-205ENST00000468338 KRTAP10-11P60412 298 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms