RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 CSNK1G2-AS1Q8NCQ2 148 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 OR51A4Q8NGJ6 313 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 OR2G2Q8NGZ5 317 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 CXorf58Q96LI9 332 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 RNF2Q99496 336 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 C20orf24Q9BUV8 137 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 REEP1Q9H902 201 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 GNG8Q9UK08 70 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 PEX16Q9Y5Y5 336 aa8.16□□□□□ -1.1
VPS26A-204ENST00000467852 TRBV5-7A0A0A0MS05 114 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 A0A1W2PQL4 384 aaPredicted RBP8.15□□□□□ -1.1
VPS26A-204ENST00000467852 ITGB1BP1O14713 200 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 CREBL2O60519 120 aaPredicted RBP8.15□□□□□ -1.1
VPS26A-204ENST00000467852 ZNF780AO75290 641 aaPredicted RBP8.15□□□□□ -1.1
VPS26A-204ENST00000467852 GTF2F2P13984 249 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 HIST1H1BP16401 226 aaKnown RBP8.15□□□□□ -1.1
VPS26A-204ENST00000467852 C4BPBP20851 252 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 USF2Q15853 346 aaPredicted RBP8.15□□□□□ -1.1
VPS26A-204ENST00000467852 NXNL2Q5VZ03 156 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 TMEM236Q5W0B7 351 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 GSG1LQ6UXU4 331 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 TRPT1Q86TN4 253 aaKnown RBP8.15□□□□□ -1.1
VPS26A-204ENST00000467852 NSMCE2Q96MF7 247 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 FYTTD1Q96QD9 318 aaKnown RBP8.15□□□□□ -1.1
VPS26A-204ENST00000467852 AGMATQ9BSE5 352 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 KRTAP1-5Q9BYS1 174 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 Q9H3A6 140 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 SAR1AQ9NR31 198 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 AP5S1Q9NUS5 200 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 PRR13Q9NZ81 148 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 ABCD2Q9UBJ2 740 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 LINC00588Q9Y4M8 146 aa8.15□□□□□ -1.1
VPS26A-204ENST00000467852 SRRM4A7MD48 611 aaKnown RBP8.14□□□□□ -1.11
VPS26A-204ENST00000467852 NPIPB5A8MRT5 1133 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 K7EMT4 169 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 ZNF207O43670 478 aaKnown RBP8.14□□□□□ -1.11
VPS26A-204ENST00000467852 PROP1O75360 226 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 SC5DO75845 299 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 OR2T7P0C7T2 308 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 RAB3AP20336 220 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 GK3PQ14409 553 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 OXA1LQ15070 435 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 CEACAM19Q7Z692 300 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 OR51A2Q8NGJ7 313 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 MRPL30Q8TCC3 161 aaKnown RBP8.14□□□□□ -1.11
VPS26A-204ENST00000467852 DYDC1Q8WWB3 177 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 TMEM70Q9BUB7 260 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 EFCAB1Q9HAE3 211 aa8.14□□□□□ -1.11
VPS26A-204ENST00000467852 RPS10-NUDT3A0A1W2PQS6 291 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 UBE2QL1A1L167 161 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 MFSD2BA6NFX1 497 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 HMX3A6NHT5 357 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 DNASE2O00115 360 aaPredicted RBP8.13□□□□□ -1.11
VPS26A-204ENST00000467852 NUDT3O95989 172 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 P0C879 139 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 OSMP13725 252 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 UBE2KP61086 200 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 HMGN3Q15651 99 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 TP53I3Q53FA7 332 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 RNASE12Q5GAN4 147 aaKnown RBP8.13□□□□□ -1.11
VPS26A-204ENST00000467852 IDO2Q6ZQW0 420 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 C19orf35Q6ZS72 473 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 GIPC3Q8TF64 312 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 C11orf54Q9H0W9 315 aaPredicted RBP8.13□□□□□ -1.11
VPS26A-204ENST00000467852 FNDC4Q9H6D8 234 aaPredicted RBP8.13□□□□□ -1.11
VPS26A-204ENST00000467852 DKK2Q9UBU2 259 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 SMPXQ9UHP9 88 aa8.13□□□□□ -1.11
VPS26A-204ENST00000467852 M0R1X1 148 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 NDUFA4O00483 81 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 GLAP06280 429 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 DEFA4P12838 97 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 GNB3P16520 340 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 SOX2P48431 317 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 PSME3P61289 254 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 PLA2G7Q13093 441 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 KIR3DS1Q14943 382 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 ATP6AP1Q15904 470 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 FAM222AQ5U5X8 452 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 MMD2Q8IY49 270 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 LILRB2Q8N423 598 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 PARP16Q8N5Y8 322 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 OR10H4Q8NGA5 316 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 RHPN1-AS1Q9BWJ2 59 aa8.12□□□□□ -1.11
VPS26A-204ENST00000467852 ZNF430Q9H8G1 570 aaPredicted RBP8.12□□□□□ -1.11
VPS26A-204ENST00000467852 IGHV3OR16-8A0A075B7F1 116 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 A0A1W2PP11 408 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 CHEK1O14757 476 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 HTR1AP08908 422 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 CEACAM6P40199 344 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 CCR9P51686 369 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 GPR176Q14439 515 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 CLINT1Q14677 625 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 RTL8BQ17RB0 113 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 C10orf55Q5SWW7 151 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 OR2T5Q6IEZ7 315 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 HACD2Q6Y1H2 254 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 SSX7Q7RTT5 188 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 TMEM116Q8NCL8 245 aa8.11□□□□□ -1.11
VPS26A-204ENST00000467852 OR2T29Q8NH02 315 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms