RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 GJC3Q8NFK1 279 aa12.89□□□□□ -0.35
SNED1-208ENST00000466618 OR2H1Q9GZK4 316 aa12.89□□□□□ -0.35
SNED1-208ENST00000466618 PLK3Q9H4B4 646 aa12.89□□□□□ -0.35
SNED1-208ENST00000466618 TP53TG3Q9ULZ0 132 aa12.89□□□□□ -0.35
SNED1-208ENST00000466618 TRAPPC1Q9Y5R8 145 aa12.89□□□□□ -0.35
SNED1-208ENST00000466618 DOPEY1Q5JWR5 2465 aa12.89□□□□□ -0.35
SNED1-208ENST00000466618 TENM4Q6N022 2769 aa12.89□□□□□ -0.35
SNED1-208ENST00000466618 A0A1W2PR80 420 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 AGFG2O95081 481 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 NDUFB8O95169 186 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 IGKV1D-33P01593 117 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 IGKV1-33P01594 117 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 LINC00310P59036 64 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 SERF2P84101 59 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 LRRC75BQ2VPJ9 315 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 TMEM144Q7Z5S9 345 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 NANOS1Q8WY41 292 aaKnown RBP12.88□□□□□ -0.35
SNED1-208ENST00000466618 C22orf15Q8WYQ4 148 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 C10orf35Q96D05 121 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 GAL3ST2Q9H3Q3 398 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 ARR3P36575 388 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 CDKN1AP38936 164 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 RANP62826 216 aaKnown RBP12.88□□□□□ -0.35
SNED1-208ENST00000466618 FAM78BQ5VT40 261 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 KCNIP4Q6PIL6 250 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 ASCL4Q6XD76 172 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 MDP1Q86V88 176 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 FAM169BQ8N8A8 192 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 LHX4Q969G2 390 aa12.88□□□□□ -0.35
SNED1-208ENST00000466618 IGKV1D-13A0A0B4J2D9 117 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 ITGB1BP1O14713 200 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 IGKV3-15P01624 115 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 THBDP07204 575 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 IGKV1-13P0DP09 117 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 HOXC12P31275 282 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 COMPP49747 757 aaPredicted RBP12.87□□□□□ -0.35
SNED1-208ENST00000466618 SELENOTP62341 195 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 SNAI3Q3KNW1 292 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 RPP25LQ8N5L8 163 aaKnown RBP12.87□□□□□ -0.35
SNED1-208ENST00000466618 CPEB3Q8NE35 698 aaKnown RBP12.87□□□□□ -0.35
SNED1-208ENST00000466618 GATAD1Q8WUU5 269 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 SPSB1Q96BD6 273 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 SLC35E1Q96K37 410 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 COL12A1Q99715 3063 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 OR6C6A6NF89 314 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 SYNGR3O43761 229 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 DAZAP2Q15038 168 aaPredicted RBP12.87□□□□□ -0.35
SNED1-208ENST00000466618 TESK1Q15569 626 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 OR5D13Q8NGL4 314 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 PPIAL4AQ9Y536 164 aa12.87□□□□□ -0.35
SNED1-208ENST00000466618 DIDO1Q9BTC0 2240 aaKnown RBP12.86□□□□□ -0.35
SNED1-208ENST00000466618 A0A0U1RQK1 487 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 ZNF320A2RRD8 509 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 CCL25O15444 150 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 PDCD6O75340 191 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 IGLV1-44P01699 117 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 IGFBP2P18065 325 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 OTX1P32242 354 aaPredicted RBP12.86□□□□□ -0.35
SNED1-208ENST00000466618 ADMP35318 185 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 CHRNA7P36544 502 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 KRTAP27-1Q3LI81 207 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 SSX8Q7RTT4 187 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 OSR2Q8N2R0 312 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 PINX1Q96BK5 328 aaKnown RBP12.86□□□□□ -0.35
SNED1-208ENST00000466618 GPR146Q96CH1 333 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 RAB40CQ96S21 281 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 VAMP8Q9BV40 100 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 WDR61Q9GZS3 305 aaKnown RBP12.86□□□□□ -0.35
SNED1-208ENST00000466618 OR51B6Q9H340 312 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 ST3GAL6Q9Y274 331 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 RTTNQ86VV8 2226 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 MLNRO43193 412 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 OR4F5Q8NH21 305 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 OR4F4Q96R69 305 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 SLC39A9Q9NUM3 307 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 PLEK2Q9NYT0 353 aa12.86□□□□□ -0.35
SNED1-208ENST00000466618 GRIFINA4D1Z8 144 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 C19orf84I3L1E1 186 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 HMGB3O15347 200 aaKnown RBP12.85□□□□□ -0.35
SNED1-208ENST00000466618 CRYGSP22914 178 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 CDKN1BP46527 198 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 PSMB3P49720 205 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 PRSS12P56730 875 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 PPP1CBP62140 327 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 IZUMO4Q1ZYL8 232 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 C3orf36Q3SXR2 165 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 AARDQ4LEZ3 155 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 MYPOPQ86VE0 399 aaPredicted RBP12.85□□□□□ -0.35
SNED1-208ENST00000466618 OR1F12Q8NHA8 337 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 CCL28Q9NRJ3 127 aa12.85□□□□□ -0.35
SNED1-208ENST00000466618 NKX6-3A6NJ46 265 aa12.84□□□□□ -0.35
SNED1-208ENST00000466618 H0Y980 276 aa12.84□□□□□ -0.35
SNED1-208ENST00000466618 M0R135 149 aa12.84□□□□□ -0.35
SNED1-208ENST00000466618 VENTXO95231 258 aa12.84□□□□□ -0.35
SNED1-208ENST00000466618 WNT2P09544 360 aa12.84□□□□□ -0.35
SNED1-208ENST00000466618 IAPPP10997 89 aa12.84□□□□□ -0.35
SNED1-208ENST00000466618 TPPP2P59282 170 aa12.84□□□□□ -0.35
SNED1-208ENST00000466618 PAFAH1B2P68402 229 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms