RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 PIGPP57054 158 aa11.42□□□□□ -0.58
DNMT3A-208ENST00000466601 UBE2KP61086 200 aa11.42□□□□□ -0.58
DNMT3A-208ENST00000466601 FOXRED2Q8IWF2 684 aa11.42□□□□□ -0.58
DNMT3A-208ENST00000466601 TCTEX1D1Q8N7M0 179 aa11.42□□□□□ -0.58
DNMT3A-208ENST00000466601 TEX45Q8NA69 505 aa11.42□□□□□ -0.58
DNMT3A-208ENST00000466601 TPSG1Q9NRR2 321 aa11.42□□□□□ -0.58
DNMT3A-208ENST00000466601 GPR132Q9UNW8 380 aa11.42□□□□□ -0.58
DNMT3A-208ENST00000466601 COL6A5A8TX70 2615 aa11.42□□□□□ -0.58
DNMT3A-208ENST00000466601 AP4M1O00189 453 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 MPPED1O15442 326 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 HPRT1P00492 218 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 HRASP01112 189 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 SAA1P0DJI8 122 aaPredicted RBP11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 KRTAP10-3P60369 221 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 CX3CL1P78423 397 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 CENPVQ7Z7K6 275 aaPredicted RBP11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 PPP1R27Q86WC6 154 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 CCDC71LQ8N9Z2 235 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 NOL4LQ96MY1 436 aaPredicted RBP11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 SCGB3A2Q96PL1 93 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 RTBDNQ9BSG5 229 aaPredicted RBP11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 CCDC32Q9BV29 185 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 WDR12Q9GZL7 423 aaKnown RBP11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 OR51J1Q9H342 316 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 PLEKHA2Q9HB19 425 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 COPZ2Q9P299 210 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 LINC00527Q9UJ94 153 aa11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 C14orf166Q9Y224 244 aaKnown RBP11.41□□□□□ -0.58
DNMT3A-208ENST00000466601 LINC00854A0A1B0GVQ3 168 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 NAP1L6A6NFF2 107 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 S1PR2O95136 353 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 CA2P00918 260 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 CD40LGP29965 261 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 LPAR6P43657 344 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 TAS2R31P59538 309 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 SRSF4Q08170 494 aaKnown RBP11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 ZNF846Q147U1 533 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 ZNF585BQ52M93 769 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 SHISA2Q6UWI4 295 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 ZNF562Q6V9R5 426 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 VKORC1L1Q8N0U8 176 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 STPG2Q8N412 459 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 VSTM2AQ8TAG5 236 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 CHPT1Q8WUD6 406 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 RHOVQ96L33 236 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 AIFM2Q9BRQ8 373 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 C5orf66Q9H5L9 145 aa11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 FAM212BQ9NTI7 297 aaPredicted RBP11.4□□□□□ -0.58
DNMT3A-208ENST00000466601 FBN3Q75N90 2809 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 CENPXA8MT69 81 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 ATP6V0E1O15342 81 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 OR2A4O95047 310 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 IGF1P05019 195 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 NQO2P16083 231 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 PJVKQ0ZLH3 352 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 SSX9Q7RTT3 188 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 PUSL1Q8N0Z8 303 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 WIPF2Q8TF74 440 aaPredicted RBP11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 OR2A7Q96R45 310 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 CITED1Q99966 193 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 C7orf50Q9BRJ6 194 aaKnown RBP11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 PARP11Q9NR21 331 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 COMMD9Q9P000 198 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 VSIG4Q9Y279 399 aa11.39□□□□□ -0.59
DNMT3A-208ENST00000466601 C3orf85A0A1B0GTC6 90 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 PSMB11A5LHX3 300 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 H0Y980 276 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 GNB1P62873 340 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 NDPQ00604 133 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 FXYD3Q14802 87 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 POU2AF1Q16633 256 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 PRSS8Q16651 343 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 MRGPRG-AS1Q2M3A8 158 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 OR5AU1Q8NGC0 362 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 TMEM167AQ8TBQ9 72 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 ABHD5Q8WTS1 349 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 R3HDM4Q96D70 268 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 TP53RKQ96S44 253 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 SLC25A21Q9BQT8 299 aaPredicted RBP11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 GON7Q9BXV9 100 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 FBXO7Q9Y3I1 522 aa11.38□□□□□ -0.59
DNMT3A-208ENST00000466601 TEX13DA0A0J9YY54 714 aaPredicted RBP11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 ARPC1BO15143 372 aaKnown RBP11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 PLA2G10O15496 165 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 CREBL2O60519 120 aaPredicted RBP11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 KBTBD11O94819 623 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 CNIH1O95406 144 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 SERPINE2P07093 398 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 EGR2P11161 476 aaPredicted RBP11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 VDAC1P21796 283 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 ERVK-16P61578 105 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 SLC35B1P78383 322 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 SSBP2P81877 361 aaPredicted RBP11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 OR4A47Q6IF82 309 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 C10orf99Q6UWK7 81 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 ZNF329Q86UD4 541 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 MMD2Q8IY49 270 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 C11orf44Q8N8P7 122 aa11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 ADAD2Q8NCV1 583 aaKnown RBP11.37□□□□□ -0.59
DNMT3A-208ENST00000466601 DMBX1Q8NFW5 382 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms