RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.3□□□□□ -1.08
PMF1-204ENST00000466489 SYNGR2O43760 224 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 CHST1O43916 411 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 MPDU1O75352 247 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 NXPH2O95156 264 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 CDX1P47902 265 aaPredicted RBP8.3□□□□□ -1.08
PMF1-204ENST00000466489 SNRPEP62304 92 aaKnown RBP8.3□□□□□ -1.08
PMF1-204ENST00000466489 SRSF3P84103 164 aaKnown RBP8.3□□□□□ -1.08
PMF1-204ENST00000466489 PIGYQ3MUY2 71 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 HEPN1Q6WQI6 88 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 ZNF826PQ6ZT77 177 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 HSD17B11Q8NBQ5 300 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 OR10V1Q8NGI7 309 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 CLDND2Q8NHS1 167 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 PPP1R35Q8TAP8 253 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 AGMATQ9BSE5 352 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 ZNF665Q9H7R5 613 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 MANBALQ9NQG1 85 aa8.3□□□□□ -1.08
PMF1-204ENST00000466489 GAR1Q9NY12 217 aaKnown RBP8.3□□□□□ -1.08
PMF1-204ENST00000466489 IGKV1-27A0A075B6S5 117 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 IGKV1D-8A0A087WSZ0 117 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 C3orf80F5H4A9 247 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 PPP1R2P9O14990 202 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 TXNL1O43396 289 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 KCNAB3O43448 404 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 ADAM20O43506 726 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 SSSCA1O60232 199 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 FOXH1O75593 365 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 VENTXO95231 258 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 LHBP01229 141 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 IGHV2-5P01817 119 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 PSMB3P49720 205 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 NHLH2Q02577 135 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 HABP2Q14520 560 aaPredicted RBP8.29□□□□□ -1.08
PMF1-204ENST00000466489 DMRTC1Q5HYR2 192 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 CLEC9AQ6UXN8 241 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 TMEM182Q6ZP80 229 aaPredicted RBP8.29□□□□□ -1.08
PMF1-204ENST00000466489 FAM90A1Q86YD7 464 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 CIARTQ8N365 385 aaPredicted RBP8.29□□□□□ -1.08
PMF1-204ENST00000466489 GCSAMQ8N6F7 178 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 LINC01356Q8N9X3 169 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 MAPK1IP1LQ8NDC0 245 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 DEFB108BQ8NET1 73 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 OR52M1Q8NGK5 317 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 NEIL1Q96FI4 390 aaPredicted RBP8.29□□□□□ -1.08
PMF1-204ENST00000466489 OR5B12Q96R08 314 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 TP53RKQ96S44 253 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 C11orf1Q9H5F2 150 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 TMEM231Q9H6L2 316 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 PATZ1Q9HBE1 687 aaKnown RBP8.29□□□□□ -1.08
PMF1-204ENST00000466489 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.29□□□□□ -1.08
PMF1-204ENST00000466489 DCAF16Q9NXF7 216 aa8.29□□□□□ -1.08
PMF1-204ENST00000466489 RBM7Q9Y580 266 aaKnown RBP8.29□□□□□ -1.08
PMF1-204ENST00000466489 PUS1Q9Y606 427 aaKnown RBP eCLIP8.29□□□□□ -1.08
PMF1-204ENST00000466489 WNK2Q9Y3S1 2297 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 TRBV24-1A0A075B6N3 115 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 A0A096LNT2 108 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 TRAV20A0A0B4J274 112 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 IGKV1-12A0A0C4DH73 117 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 CYB5BO43169 146 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 CD5LO43866 347 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 ZNF205O95201 554 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 IGKV1D-12P01611 117 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 FABP1P07148 127 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 PGA5P0DJD9 388 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 HOXA5P20719 270 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 POLR2GP62487 172 aaKnown RBP eCLIP8.28□□□□□ -1.08
PMF1-204ENST00000466489 GNB2P62879 340 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 PAX5Q02548 391 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 FABP9Q0Z7S8 132 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 ZNF146Q15072 292 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 TMEM30BQ3MIR4 351 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 TMEM41BQ5BJD5 291 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 TEX36Q5VZQ5 186 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 ZNF66Q6ZN08 573 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 C11orf53Q8IXP5 236 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 FAM24BQ8N5W8 94 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 TEX29Q8N6K0 151 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 NANPQ8TBE9 248 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 GALMQ96C23 342 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 ANAPC16Q96DE5 110 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 IMMP2LQ96T52 175 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 SSBP3Q9BWW4 388 aaPredicted RBP8.28□□□□□ -1.08
PMF1-204ENST00000466489 SCRT1Q9BWW7 348 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 CLN8Q9UBY8 286 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 ZMAT5Q9UDW3 170 aaKnown RBP8.28□□□□□ -1.08
PMF1-204ENST00000466489 PITPNC1Q9UKF7 332 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 TRAPPC2LQ9UL33 140 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 KCNS2Q9ULS6 477 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 DMRT1Q9Y5R6 373 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 TLN2Q9Y4G6 2542 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 CSPG4Q6UVK1 2322 aa8.28□□□□□ -1.08
PMF1-204ENST00000466489 AKAP9Q99996 3911 aa8.27□□□□□ -1.08
PMF1-204ENST00000466489 HIVEP2P31629 2446 aa8.27□□□□□ -1.09
PMF1-204ENST00000466489 TMEM30CPA0ZSE6 113 aa8.27□□□□□ -1.09
PMF1-204ENST00000466489 PCP4L1A6NKN8 68 aa8.27□□□□□ -1.09
PMF1-204ENST00000466489 TMPRSS2O15393 492 aa8.27□□□□□ -1.09
PMF1-204ENST00000466489 NDUFB3O43676 98 aa8.27□□□□□ -1.09
PMF1-204ENST00000466489 SYNGR1O43759 233 aa8.27□□□□□ -1.09
PMF1-204ENST00000466489 RHBDL1O75783 438 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms