RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 MDFIC2A0A1B0GVS7 189 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 A0A1W2PPE3 182 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 MEIS3P1A6NDR6 274 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 NCBP2LA6PVI3 153 aaKnown RBP5.52□□□□□ -1.53
CLDN4-204ENST00000466411 H0YJW9 148 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 NBR2O15453 112 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 HLA-DRB1P01911 266 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 PMP2P02689 132 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 CD3DP04234 171 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 AMY2AP04746 511 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 AADACP22760 399 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 DUTP33316 252 aaKnown RBP5.52□□□□□ -1.53
CLDN4-204ENST00000466411 RFX2P48378 723 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 SLC35B1P78383 322 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 DGCR2P98153 550 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 ZNF846Q147U1 533 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 PLGLAQ15195 96 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 MMDQ15546 238 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 VMA21Q3ZAQ7 101 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 ZNF660Q6AZW8 331 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-204ENST00000466411 LYSMD2Q8IV50 215 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 CADM3Q8N126 398 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 Q8N2B8 174 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 COMMD1Q8N668 190 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 NPBQ8NG41 125 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 FAM110DQ8TAY7 271 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-204ENST00000466411 PIFOQ8TCI5 191 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 SLC25A21Q9BQT8 299 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-204ENST00000466411 MRPL20Q9BYC9 149 aaKnown RBP5.52□□□□□ -1.53
CLDN4-204ENST00000466411 SLC35D1Q9NTN3 355 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 AURKAIP1Q9NWT8 199 aaPredicted RBP5.52□□□□□ -1.53
CLDN4-204ENST00000466411 COMMD9Q9P000 198 aa5.52□□□□□ -1.53
CLDN4-204ENST00000466411 C14orf166Q9Y224 244 aaKnown RBP5.52□□□□□ -1.53
CLDN4-204ENST00000466411 STAB2Q8WWQ8 2551 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 CLPSL1A2RUU4 121 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 C3orf84H3BNL1 204 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 AP4M1O00189 453 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 NDUFA3O95167 84 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 HPRT1P00492 218 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 CT45A6P0DMU7 189 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 CT45A5P0DMU8 189 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 CT45A7P0DMV0 189 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 PTHLHP12272 177 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 ANXA3P12429 323 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 SLC6A1P30531 599 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 MAS1LP35410 378 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 VDAC2P45880 294 aaPredicted RBP5.51□□□□□ -1.53
CLDN4-204ENST00000466411 REG1BP48304 166 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 PPP5CP53041 499 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 TAS2R31P59538 309 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 FXYD4P59646 89 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 UBE2MP61081 183 aaKnown RBP5.51□□□□□ -1.53
CLDN4-204ENST00000466411 ERVK-16P61578 105 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 RND3P61587 244 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 SRPXP78539 464 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 PRB3Q04118 309 aaPredicted RBP5.51□□□□□ -1.53
CLDN4-204ENST00000466411 TMEM267Q0VDI3 215 aaPredicted RBP5.51□□□□□ -1.53
CLDN4-204ENST00000466411 RBMS2Q15434 407 aaKnown RBP5.51□□□□□ -1.53
CLDN4-204ENST00000466411 LY6EQ16553 131 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 SCGB2B2Q4G0G5 96 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 TM4SF20Q53R12 229 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 TMEM177Q53S58 311 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 RPL39P5Q59GN2 51 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 LDLRAD2Q5SZI1 272 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 ZNF57Q68EA5 555 aaPredicted RBP5.51□□□□□ -1.53
CLDN4-204ENST00000466411 THOC7Q6I9Y2 204 aaKnown RBP5.51□□□□□ -1.53
CLDN4-204ENST00000466411 LHFPL1Q86WI0 220 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 DYNAPQ8N1N2 210 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 FAM71E2Q8N5Q1 922 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 Q8N6K4 173 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 OR4A5Q8NH83 315 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 CHPT1Q8WUD6 406 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 C17orf50Q8WW18 174 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 TCTEX1D2Q8WW35 142 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 HARBI1Q96MB7 349 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 TMEM68Q96MH6 324 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 TSC22D3Q99576 134 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 SRRQ9GZT4 340 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 PLEKHA2Q9HB19 425 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 MCUBQ9NWR8 336 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 COPZ2Q9P299 210 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 RNF150Q9ULK6 438 aa5.51□□□□□ -1.53
CLDN4-204ENST00000466411 RRHO14718 337 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 ACTL6BO94805 426 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 SERPINE2P07093 398 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 CTSDP07339 412 aaPredicted RBP5.5□□□□□ -1.53
CLDN4-204ENST00000466411 PGAM2P15259 253 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 NQO2P16083 231 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 F2RP25116 425 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 DEFA1P59665 94 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 DEFA3P59666 94 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 UBE2KP61086 200 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 RPS16P62249 146 aaKnown RBP5.5□□□□□ -1.53
CLDN4-204ENST00000466411 ZNF79Q15937 498 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 C5orf64Q2M2E5 130 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 AADACL3Q5VUY0 350 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 MZT2BQ6NZ67 158 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 IDO2Q6ZQW0 420 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 ZNF818PQ6ZRF7 136 aa5.5□□□□□ -1.53
CLDN4-204ENST00000466411 PPP1R27Q86WC6 154 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms