RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 LCN12Q6JVE5 192 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 PRSS48Q7RTY5 328 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 Q8N402 240 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 USMG5Q96IX5 58 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 GINS4Q9BRT9 223 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 HIPK2Q9H2X6 1198 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 SIGLEC8Q9NYZ4 499 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 S4R3C0 116 aa15.56■□□□□ 0.08
COL6A1-203ENST00000466285 RBMY1BA6NDE4 496 aaKnown RBP15.55■□□□□ 0.08
COL6A1-203ENST00000466285 RBMY1EA6NEQ0 496 aaKnown RBP15.55■□□□□ 0.08
COL6A1-203ENST00000466285 HMX3A6NHT5 357 aa15.55■□□□□ 0.08
COL6A1-203ENST00000466285 IFITM5A6NNB3 132 aa15.55■□□□□ 0.08
COL6A1-203ENST00000466285 E7EUB6 86 aa15.55■□□□□ 0.08
COL6A1-203ENST00000466285 RBMY1DP0C7P1 496 aaKnown RBP15.55■□□□□ 0.08
COL6A1-203ENST00000466285 CD81P60033 236 aa15.55■□□□□ 0.08
COL6A1-203ENST00000466285 MRPS15P82914 257 aaKnown RBP15.55■□□□□ 0.08
COL6A1-203ENST00000466285 VMA21Q3ZAQ7 101 aa15.55■□□□□ 0.08
COL6A1-203ENST00000466285 DEFB125Q8N687 156 aa15.55■□□□□ 0.08
COL6A1-203ENST00000466285 TEX45Q8NA69 505 aa15.55■□□□□ 0.08
COL6A1-203ENST00000466285 CACNG8Q8WXS5 425 aa15.55■□□□□ 0.08
COL6A1-203ENST00000466285 TMEM68Q96MH6 324 aa15.55■□□□□ 0.08
COL6A1-203ENST00000466285 GPHA2Q96T91 129 aa15.55■□□□□ 0.08
COL6A1-203ENST00000466285 RBM7Q9Y580 266 aaKnown RBP15.55■□□□□ 0.08
COL6A1-203ENST00000466285 ZNF785A8K8V0 405 aa15.54■□□□□ 0.08
COL6A1-203ENST00000466285 TEX22C9J3V5 150 aa15.54■□□□□ 0.08
COL6A1-203ENST00000466285 MPPED1O15442 326 aa15.54■□□□□ 0.08
COL6A1-203ENST00000466285 OR2J3O76001 311 aa15.54■□□□□ 0.08
COL6A1-203ENST00000466285 IGHV3-23P01764 117 aa15.54■□□□□ 0.08
COL6A1-203ENST00000466285 MYOD1P15172 320 aa15.54■□□□□ 0.08
COL6A1-203ENST00000466285 GTSCR1Q86UQ5 136 aa15.54■□□□□ 0.08
COL6A1-203ENST00000466285 TUBA4BQ9H853 241 aa15.54■□□□□ 0.08
COL6A1-203ENST00000466285 ACOT13Q9NPJ3 140 aa15.54■□□□□ 0.08
COL6A1-203ENST00000466285 CEPT1Q9Y6K0 416 aa15.54■□□□□ 0.08
COL6A1-203ENST00000466285 FCGR3BO75015 233 aa15.53■□□□□ 0.08
COL6A1-203ENST00000466285 DIRAS3O95661 229 aa15.53■□□□□ 0.08
COL6A1-203ENST00000466285 NFYAP23511 347 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-203ENST00000466285 BRWD1-AS2P59051 145 aa15.53■□□□□ 0.08
COL6A1-203ENST00000466285 CBX3Q13185 183 aa15.53■□□□□ 0.08
COL6A1-203ENST00000466285 ARFRP1Q13795 201 aa15.53■□□□□ 0.08
COL6A1-203ENST00000466285 CDK10Q15131 360 aa15.53■□□□□ 0.08
COL6A1-203ENST00000466285 TBCEQ15813 527 aaPredicted RBP15.53■□□□□ 0.08
COL6A1-203ENST00000466285 NUDCD2Q8WVJ2 157 aa15.53■□□□□ 0.08
COL6A1-203ENST00000466285 NEURL2Q9BR09 285 aa15.53■□□□□ 0.08
COL6A1-203ENST00000466285 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.52■□□□□ 0.08
COL6A1-203ENST00000466285 TRAV1-2A0A0B4J238 106 aa15.52■□□□□ 0.08
COL6A1-203ENST00000466285 FAM223BA6NKX1 122 aa15.52■□□□□ 0.08
COL6A1-203ENST00000466285 RRASP10301 218 aa15.52■□□□□ 0.08
COL6A1-203ENST00000466285 RAB6AP20340 208 aa15.52■□□□□ 0.08
COL6A1-203ENST00000466285 EIF4EBP1Q13541 118 aaPredicted RBP15.52■□□□□ 0.08
COL6A1-203ENST00000466285 Q6ZS49 121 aa15.52■□□□□ 0.08
COL6A1-203ENST00000466285 KCTD9Q7L273 389 aa15.52■□□□□ 0.08
COL6A1-203ENST00000466285 FAM223AQ8IWN6 122 aa15.52■□□□□ 0.08
COL6A1-203ENST00000466285 SNAPC3Q92966 411 aa15.52■□□□□ 0.08
COL6A1-203ENST00000466285 WDR89Q96FK6 387 aaPredicted RBP15.52■□□□□ 0.08
COL6A1-203ENST00000466285 CCDC140Q96MF4 163 aa15.52■□□□□ 0.08
COL6A1-203ENST00000466285 NDUFB11Q9NX14 153 aa15.52■□□□□ 0.08
COL6A1-203ENST00000466285 IL6RP08887 468 aaPredicted RBP15.51■□□□□ 0.07
COL6A1-203ENST00000466285 GADD45AP24522 165 aa15.51■□□□□ 0.07
COL6A1-203ENST00000466285 ATP5G2Q06055 141 aa15.51■□□□□ 0.07
COL6A1-203ENST00000466285 C15orf32Q32M92 178 aa15.51■□□□□ 0.07
COL6A1-203ENST00000466285 C22orf42Q6IC83 251 aa15.51■□□□□ 0.07
COL6A1-203ENST00000466285 ZNF367Q7RTV3 350 aa15.51■□□□□ 0.07
COL6A1-203ENST00000466285 ZNF645Q8N7E2 425 aa15.51■□□□□ 0.07
COL6A1-203ENST00000466285 OSR1Q8TAX0 266 aaPredicted RBP15.51■□□□□ 0.07
COL6A1-203ENST00000466285 ATG5Q9H1Y0 275 aa15.51■□□□□ 0.07
COL6A1-203ENST00000466285 TMEM235A6NFC5 223 aa15.5■□□□□ 0.07
COL6A1-203ENST00000466285 C2orf70A6NJV1 201 aa15.5■□□□□ 0.07
COL6A1-203ENST00000466285 SSX5O60225 188 aa15.5■□□□□ 0.07
COL6A1-203ENST00000466285 AREGP15514 252 aa15.5■□□□□ 0.07
COL6A1-203ENST00000466285 RAB3BP20337 219 aa15.5■□□□□ 0.07
COL6A1-203ENST00000466285 DEFB114Q30KQ6 69 aa15.5■□□□□ 0.07
COL6A1-203ENST00000466285 TTC9CQ8N5M4 171 aa15.5■□□□□ 0.07
COL6A1-203ENST00000466285 ADTRPQ96IZ2 230 aa15.5■□□□□ 0.07
COL6A1-203ENST00000466285 RBMX2Q9Y388 322 aaKnown RBP15.5■□□□□ 0.07
COL6A1-203ENST00000466285 CGB1A6NKQ9 187 aa15.49■□□□□ 0.07
COL6A1-203ENST00000466285 TUSC2O75896 110 aa15.49■□□□□ 0.07
COL6A1-203ENST00000466285 NDUFB8O95169 186 aa15.49■□□□□ 0.07
COL6A1-203ENST00000466285 OR2C1O95371 312 aa15.49■□□□□ 0.07
COL6A1-203ENST00000466285 PTHLHP12272 177 aa15.49■□□□□ 0.07
COL6A1-203ENST00000466285 CNBD2Q96M20 576 aa15.49■□□□□ 0.07
COL6A1-203ENST00000466285 ST6GALNAC5Q9BVH7 336 aa15.49■□□□□ 0.07
COL6A1-203ENST00000466285 SRD5A3Q9H8P0 318 aa15.49■□□□□ 0.07
COL6A1-203ENST00000466285 PEMTQ9UBM1 199 aa15.49■□□□□ 0.07
COL6A1-203ENST00000466285 PDCD5O14737 125 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 HLA-DQB1P01920 261 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 FOLR2P14207 255 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 DTYMKP23919 212 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 MYL9P24844 172 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 TALDO1P37837 337 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 CDNFQ49AH0 187 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 NECAP1Q8NC96 275 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 OR2K2Q8NGT1 345 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 DYNLRB2Q8TF09 96 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 FANCD2OSQ96PS1 177 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 DCUN1D5Q9BTE7 237 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 ZC4H2Q9NQZ6 224 aa15.48■□□□□ 0.07
COL6A1-203ENST00000466285 TRDV1A0A1B0GX56 115 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 TPPPO94811 219 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 KBTBD11O94819 623 aa15.47■□□□□ 0.07
COL6A1-203ENST00000466285 IFNA6P05013 189 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms