RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 YPEL2Q96QA6 119 aa4.13□□□□□ -1.75
NCL-208ENST00000466274 KCTD14Q9BQ13 255 aaPredicted RBP4.13□□□□□ -1.75
NCL-208ENST00000466274 SPACA1Q9HBV2 294 aa4.13□□□□□ -1.75
NCL-208ENST00000466274 SAR1AQ9NR31 198 aa4.13□□□□□ -1.75
NCL-208ENST00000466274 SMPD3Q9NY59 655 aaPredicted RBP4.13□□□□□ -1.75
NCL-208ENST00000466274 RAB21Q9UL25 225 aa4.13□□□□□ -1.75
NCL-208ENST00000466274 ST3GAL6Q9Y274 331 aa4.13□□□□□ -1.75
NCL-208ENST00000466274 LRRC42Q9Y546 428 aa4.13□□□□□ -1.75
NCL-208ENST00000466274 FAT1Q14517 4588 aa4.13□□□□□ -1.75
NCL-208ENST00000466274 VPS13BQ7Z7G8 4022 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 TEX48A0A1B0GUV7 120 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 LOC107986453A0A1B0GWG9 222 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 FAM90A7PA6NKC0 464 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 ZNF705EA8MWA4 302 aaPredicted RBP4.12□□□□□ -1.75
NCL-208ENST00000466274 MCRIP1C9JLW8 97 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 ZNF670-ZNF695F2Z2N8 137 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 S1PR2O95136 353 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 APOA2P02652 100 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 MRPL3P09001 348 aaKnown RBP4.12□□□□□ -1.75
NCL-208ENST00000466274 SPART-AS1P0CW21 52 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 CT45A6P0DMU7 189 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 CT45A5P0DMU8 189 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 CT45A7P0DMV0 189 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 CAPGP40121 348 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 CRISP1P54107 249 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 CXCR4P61073 352 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 HTD2P86397 168 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 CBX3Q13185 183 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 RIPK1Q13546 671 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 KISS1Q15726 138 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 MPV17LQ2QL34 196 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 PIGYQ3MUY2 71 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 FAM98BQ52LJ0 330 aaKnown RBP4.12□□□□□ -1.75
NCL-208ENST00000466274 CLEC19AQ6UXS0 136 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 ZNF554Q86TJ5 538 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 PDPNQ86YL7 162 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 STHQ8IWL8 128 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 IQCF1Q8N6M8 205 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 ANP32BQ92688 251 aaKnown RBP4.12□□□□□ -1.75
NCL-208ENST00000466274 EEF1AKMT3Q96AZ1 226 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 ADAT3Q96EY9 351 aaPredicted RBP4.12□□□□□ -1.75
NCL-208ENST00000466274 PELI1Q96FA3 418 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 PYURFQ96I23 114 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 HOPXQ9BPY8 73 aaPredicted RBP4.12□□□□□ -1.75
NCL-208ENST00000466274 TTTY10Q9BZA0 68 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 WDR12Q9GZL7 423 aaKnown RBP4.12□□□□□ -1.75
NCL-208ENST00000466274 RBM38Q9H0Z9 239 aaKnown RBP4.12□□□□□ -1.75
NCL-208ENST00000466274 AAMDCQ9H7C9 122 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 TBC1D24Q9ULP9 559 aa4.12□□□□□ -1.75
NCL-208ENST00000466274 TRBV7-1A0A0A6YYK4 115 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 A0A0G2JND7 137 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 TMEM189A5PLL7 270 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 MAGEB4O15481 346 aaPredicted RBP4.11□□□□□ -1.75
NCL-208ENST00000466274 CREBL2O60519 120 aaPredicted RBP4.11□□□□□ -1.75
NCL-208ENST00000466274 CCDC22O60826 627 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 EDF1O60869 148 aaKnown RBP4.11□□□□□ -1.75
NCL-208ENST00000466274 CA11O75493 328 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 OR2J3O76001 311 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 ACTL6BO94805 426 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 DHFRP00374 187 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 PRH1P02810 166 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 APELAP0DMC3 54 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 SPP1P10451 314 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 PSMB6P28072 239 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 PPP1CCP36873 323 aaKnown RBP4.11□□□□□ -1.75
NCL-208ENST00000466274 SOX2P48431 317 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 CCL18P55774 89 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 PAFAH1B2P68402 229 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 PPP1R8Q12972 351 aaKnown RBP4.11□□□□□ -1.75
NCL-208ENST00000466274 PTGES3Q15185 160 aaKnown RBP4.11□□□□□ -1.75
NCL-208ENST00000466274 ZSCAN26Q16670 478 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 NHLRC3Q5JS37 347 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 PIK3CD-AS1Q5SR53 167 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 GLYATQ6IB77 296 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 GLDNQ6ZMI3 551 aaPredicted RBP4.11□□□□□ -1.75
NCL-208ENST00000466274 PLEKHG7Q6ZR37 379 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 TTC9CQ8N5M4 171 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 OR5D14Q8NGL3 314 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 OR52N1Q8NH53 320 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 ZNRF2Q8NHG8 242 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 GALMQ96C23 342 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 CYYR1Q96J86 154 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 CMTM3Q96MX0 182 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 GPER1Q99527 375 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 SPIN2AQ99865 258 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 SPIN2BQ9BPZ2 258 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 METTL9Q9H1A3 318 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 TAF9BQ9HBM6 251 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 ADGRL4Q9HBW9 690 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 TMEM14BQ9NUH8 114 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 PAK1IP1Q9NWT1 392 aaPredicted RBP4.11□□□□□ -1.75
NCL-208ENST00000466274 ZNF581Q9P0T4 197 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 ABCD2Q9UBJ2 740 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 CELA1Q9UNI1 258 aa4.11□□□□□ -1.75
NCL-208ENST00000466274 DPPA5A6NC42 116 aa4.1□□□□□ -1.75
NCL-208ENST00000466274 CCDC182A6NF36 153 aa4.1□□□□□ -1.75
NCL-208ENST00000466274 METTL15A6NJ78 407 aa4.1□□□□□ -1.75
NCL-208ENST00000466274 GPX5O75715 221 aa4.1□□□□□ -1.75
NCL-208ENST00000466274 SULT1C4O75897 302 aa4.1□□□□□ -1.75
NCL-208ENST00000466274 DFFBO76075 338 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms