RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SLC38A6Q8IZM9 456 aa15.95■□□□□ 0.14
SKA3-205ENST00000465471 RNF152Q8N8N0 203 aa15.95■□□□□ 0.14
SKA3-205ENST00000465471 OR4C16Q8NGL9 310 aa15.95■□□□□ 0.14
SKA3-205ENST00000465471 PARP11Q9NR21 331 aa15.95■□□□□ 0.14
SKA3-205ENST00000465471 WNK1Q9H4A3 2382 aa15.95■□□□□ 0.14
SKA3-205ENST00000465471 TNCP24821 2201 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 ARPC1BO15143 372 aaKnown RBP15.94■□□□□ 0.14
SKA3-205ENST00000465471 IGHG4P01861 327 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 RLN1P04808 185 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 AKAIN1P0CW23 69 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 SAA1P0DJI8 122 aaPredicted RBP15.94■□□□□ 0.14
SKA3-205ENST00000465471 VDAC1P21796 283 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 PPIFP30405 207 aaKnown RBP15.94■□□□□ 0.14
SKA3-205ENST00000465471 PJVKQ0ZLH3 352 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 C2orf68Q2NKX9 166 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 FAAP20Q6NZ36 180 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 SPAG16Q8N0X2 631 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 OR51H1Q8NH63 302 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 MRGPRFQ96AM1 343 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 CLCC1Q96S66 551 aa15.94■□□□□ 0.14
SKA3-205ENST00000465471 THAP7Q9BT49 309 aaPredicted RBP15.94■□□□□ 0.14
SKA3-205ENST00000465471 G3V318 75 aa15.93■□□□□ 0.14
SKA3-205ENST00000465471 PRSS8Q16651 343 aa15.93■□□□□ 0.14
SKA3-205ENST00000465471 PYDC2Q56P42 97 aa15.93■□□□□ 0.14
SKA3-205ENST00000465471 SPANXN2Q5MJ10 180 aa15.93■□□□□ 0.14
SKA3-205ENST00000465471 PUSL1Q8N0Z8 303 aaKnown RBP15.93■□□□□ 0.14
SKA3-205ENST00000465471 Q8N402 240 aa15.93■□□□□ 0.14
SKA3-205ENST00000465471 MINDY2Q8NBR6 621 aa15.93■□□□□ 0.14
SKA3-205ENST00000465471 TERB2Q8NHR7 220 aa15.93■□□□□ 0.14
SKA3-205ENST00000465471 CD300LFQ8TDQ1 290 aa15.93■□□□□ 0.14
SKA3-205ENST00000465471 ZNF486Q96H40 463 aaPredicted RBP15.93■□□□□ 0.14
SKA3-205ENST00000465471 SRRQ9GZT4 340 aa15.93■□□□□ 0.14
SKA3-205ENST00000465471 NUBP2Q9Y5Y2 271 aa15.93■□□□□ 0.14
SKA3-205ENST00000465471 MGAM2Q2M2H8 2515 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 TRAV41A0A0B4J266 112 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 TSPAN15O95858 294 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 OPN1MWP04001 364 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 OPN1MW2P0DN77 364 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 OPN1MW3P0DN78 364 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 RND3P61587 244 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 FOXE3Q13461 319 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 POU2AF1Q16633 256 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 PHLDA2Q53GA4 152 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 TEX38Q6PEX7 206 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 IDO2Q6ZQW0 420 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 TCTEX1D1Q8N7M0 179 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 ARPC1AQ92747 370 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 SLC2A9Q9NRM0 540 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 SLC2A8Q9NY64 477 aa15.92■□□□□ 0.14
SKA3-205ENST00000465471 TSSC4Q9Y5U2 329 aaPredicted RBP15.92■□□□□ 0.14
SKA3-205ENST00000465471 TCRBV4S1A1TA0A5B7 111 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 HPRT1P00492 218 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 HRASP01112 189 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 IGLV1-40P01703 118 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 ELANEP08246 267 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 F2RP25116 425 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 PSMB8P28062 276 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 PPP5CP53041 499 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 TAS2R31P59538 309 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 KLF9Q13886 244 aaPredicted RBP15.91■□□□□ 0.14
SKA3-205ENST00000465471 FXYD3Q14802 87 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 VKORC1L1Q8N0U8 176 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 RHOVQ96L33 236 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 ZNF430Q9H8G1 570 aaPredicted RBP15.91■□□□□ 0.14
SKA3-205ENST00000465471 PLEKHA2Q9HB19 425 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 FAM212BQ9NTI7 297 aaPredicted RBP15.91■□□□□ 0.14
SKA3-205ENST00000465471 COMMD9Q9P000 198 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 WSB1Q9Y6I7 421 aa15.91■□□□□ 0.14
SKA3-205ENST00000465471 DISC1C4P0D8 188 aa15.9■□□□□ 0.14
SKA3-205ENST00000465471 KBTBD11O94819 623 aa15.9■□□□□ 0.14
SKA3-205ENST00000465471 SCGB2B2Q4G0G5 96 aa15.9■□□□□ 0.14
SKA3-205ENST00000465471 ZNF585BQ52M93 769 aa15.9■□□□□ 0.14
SKA3-205ENST00000465471 AKIRIN2Q53H80 203 aa15.9■□□□□ 0.14
SKA3-205ENST00000465471 TBC1D26Q86UD7 250 aa15.9■□□□□ 0.14
SKA3-205ENST00000465471 POC5Q8NA72 575 aa15.9■□□□□ 0.14
SKA3-205ENST00000465471 VSTM2AQ8TAG5 236 aa15.9■□□□□ 0.14
SKA3-205ENST00000465471 TMEM167AQ8TBQ9 72 aa15.9■□□□□ 0.14
SKA3-205ENST00000465471 MYOZ3Q8TDC0 251 aa15.9■□□□□ 0.14
SKA3-205ENST00000465471 FAM103A1Q9BTL3 118 aaKnown RBP15.9■□□□□ 0.14
SKA3-205ENST00000465471 SOX15O60248 233 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 CREBL2O60519 120 aaPredicted RBP15.89■□□□□ 0.13
SKA3-205ENST00000465471 OR2A4O95047 310 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 S1PR2O95136 353 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 IL6RP08887 468 aaPredicted RBP15.89■□□□□ 0.13
SKA3-205ENST00000465471 S100GP29377 79 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 ECI1P42126 302 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 RPL23AP62750 156 aaKnown RBP15.89■□□□□ 0.13
SKA3-205ENST00000465471 SURF2Q15527 256 aaPredicted RBP15.89■□□□□ 0.13
SKA3-205ENST00000465471 ECSCRQ19T08 205 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 NSUN5P1Q3KNT7 163 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 MMD2Q8IY49 270 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 OR13C8Q8NGS7 320 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 OR2A7Q96R45 310 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 PRRT1Q99946 306 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 AIFM2Q9BRQ8 373 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 BET1LQ9NYM9 111 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 FBN3Q75N90 2809 aa15.89■□□□□ 0.13
SKA3-205ENST00000465471 RPLP1P05386 114 aaKnown RBP15.88■□□□□ 0.13
SKA3-205ENST00000465471 PGAM2P15259 253 aa15.88■□□□□ 0.13
SKA3-205ENST00000465471 NQO2P16083 231 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms