RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 RAB29O14966 203 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 ST8SIA5O15466 376 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 SPDEFO95238 335 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 IGHV2-5P01817 119 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 GAPDHP04406 335 aaKnown RBP11.25□□□□□ -0.61
HDAC6-215ENST00000465457 RNASE1P07998 156 aaKnown RBP11.25□□□□□ -0.61
HDAC6-215ENST00000465457 IGHV3-43DP0DP04 118 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 TMEM33P57088 247 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 VAMP2P63027 116 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 ID3Q02535 119 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 KLF17Q5JT82 389 aaPredicted RBP11.25□□□□□ -0.61
HDAC6-215ENST00000465457 HEPN1Q6WQI6 88 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 SPAG16Q8N0X2 631 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 TEX29Q8N6K0 151 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 C8orf31Q8N9H6 132 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 TIMD4Q96H15 378 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 ZNF714Q96N38 554 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 SLC25A31Q9H0C2 315 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 SLC25A32Q9H2D1 315 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 IFI27L2Q9H2X8 130 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 RPUSD1Q9UJJ7 312 aaKnown RBP11.25□□□□□ -0.61
HDAC6-215ENST00000465457 RNF150Q9ULK6 438 aa11.25□□□□□ -0.61
HDAC6-215ENST00000465457 FAM90A9PA6NNJ1 464 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 J3QLI3 93 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 PITX3O75364 302 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 JTBO76095 146 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 LY86O95711 162 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 CFDP00746 253 aaPredicted RBP11.24□□□□□ -0.61
HDAC6-215ENST00000465457 LPAR6P43657 344 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 LCN2P80188 198 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 BAXQ07812 192 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 ZNF585BQ52M93 769 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 RBMS3Q6XE24 437 aaKnown RBP11.24□□□□□ -0.61
HDAC6-215ENST00000465457 TCF23Q7RTU1 214 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 BAP18Q8IXM2 172 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 FAM210AQ96ND0 272 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 RAB40CQ96S21 281 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 GPHA2Q96T91 129 aa11.24□□□□□ -0.61
HDAC6-215ENST00000465457 RCL1Q9Y2P8 373 aaKnown RBP11.24□□□□□ -0.61
HDAC6-215ENST00000465457 BORCS7-ASMTA0A0B4J1R7 106 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 RPS10-NUDT3A0A1W2PQS6 291 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 MSGN1A6NI15 193 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 MED6O75586 246 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 IGKV1-39P01597 117 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 IGHV2-70P01814 119 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 IGKV1D-39P04432 117 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 DUTP33316 252 aaKnown RBP11.23□□□□□ -0.61
HDAC6-215ENST00000465457 THBS3P49746 956 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 TAS2R30P59541 319 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 KRTAP10-3P60369 221 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 LTC4SQ16873 150 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 TMEM155Q4W5P6 130 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 FAM71F2Q6NXP2 309 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 DUX4L9Q6RFH8 374 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-215ENST00000465457 ZNF439Q8NDP4 499 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 RAB1CQ92928 201 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 GPR146Q96CH1 333 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 S1PR3Q99500 378 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 C19orf12Q9NSK7 152 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 LYRM2Q9NU23 88 aaPredicted RBP11.23□□□□□ -0.61
HDAC6-215ENST00000465457 MED9Q9NWA0 146 aa11.23□□□□□ -0.61
HDAC6-215ENST00000465457 MDFIC2A0A1B0GVS7 189 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 M0R1X1 148 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 DVL1O14640 695 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 TOR1AO14656 332 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 SCAF4O95104 1147 aaKnown RBP11.22□□□□□ -0.61
HDAC6-215ENST00000465457 HPRT1P00492 218 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 IGKV1-5P01602 117 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 RBP4P02753 201 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 PRB2P02812 416 aaPredicted RBP11.22□□□□□ -0.61
HDAC6-215ENST00000465457 RPL23AP62750 156 aaKnown RBP11.22□□□□□ -0.61
HDAC6-215ENST00000465457 TAGLNQ01995 201 aaKnown RBP11.22□□□□□ -0.61
HDAC6-215ENST00000465457 FBLN7Q53RD9 439 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 ALKAL2Q6UX46 152 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 SLC25A48Q6ZT89 311 aaKnown RBP11.22□□□□□ -0.61
HDAC6-215ENST00000465457 PDZD9Q8IXQ8 264 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 SLC7A5P1Q8MH63 180 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 FGFRL1Q8N441 504 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 OR2C3Q8N628 320 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 KIR3DL3Q8N743 410 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 DMBX1Q8NFW5 382 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 OR4S2Q8NH73 311 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 H1FXQ92522 213 aaKnown RBP11.22□□□□□ -0.61
HDAC6-215ENST00000465457 C5orf30Q96GV9 206 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 C11orf1Q9H5F2 150 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 CACNG5Q9UF02 275 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 MIOXQ9UGB7 285 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 AUP1Q9Y679 476 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 WSB1Q9Y6I7 421 aa11.22□□□□□ -0.61
HDAC6-215ENST00000465457 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 SSSCA1O60232 199 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 TSPAN15O95858 294 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 P0C879 139 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 NFYBP25208 207 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 ERVK-16P61578 105 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 RPL30P62888 115 aaKnown RBP11.21□□□□□ -0.61
HDAC6-215ENST00000465457 CT45A1Q5HYN5 189 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 TMEM200BQ69YZ2 307 aa11.21□□□□□ -0.61
HDAC6-215ENST00000465457 DHRS7BQ6IAN0 325 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-215ENST00000465457 BTNL3Q6UXE8 466 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms