RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 KCNS2Q9ULS6 477 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 MTORP42345 2549 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 A0A1W2PPE3 182 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 SLC31A2O15432 143 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 FGF16O43320 207 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 PVALBP20472 110 aaPredicted RBP13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 GNG10P50151 68 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 NCR3LG1Q68D85 454 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 HSD17B13Q7Z5P4 300 aaPredicted RBP13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 FAM219AQ8IW50 185 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 OR11H6Q8NGC7 330 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 OR51H1Q8NH63 302 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 CXorf58Q96LI9 332 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 CLEC7AQ9BXN2 247 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 ZNRD1Q9P1U0 126 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 RCL1Q9Y2P8 373 aaKnown RBP13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 HIVEP2P31629 2446 aa13.74□□□□□ -0.21
EXOSC3-203ENST00000465229 CENPVL3A0A0U1RRI6 287 aa13.74□□□□□ -0.21
EXOSC3-203ENST00000465229 J3QR06 171 aa13.74□□□□□ -0.21
EXOSC3-203ENST00000465229 PITX3O75364 302 aa13.74□□□□□ -0.21
EXOSC3-203ENST00000465229 EIF4EBP1Q13541 118 aaPredicted RBP13.74□□□□□ -0.21
EXOSC3-203ENST00000465229 C8orf31Q8N9H6 132 aa13.74□□□□□ -0.21
EXOSC3-203ENST00000465229 OR9G1Q8NH87 305 aa13.74□□□□□ -0.21
EXOSC3-203ENST00000465229 ZNF596Q8TC21 504 aa13.74□□□□□ -0.21
EXOSC3-203ENST00000465229 AGMATQ9BSE5 352 aa13.74□□□□□ -0.21
EXOSC3-203ENST00000465229 NAV3Q8IVL0 2385 aa13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 ITGB1BP1O14713 200 aa13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 LY6G6DO95868 133 aa13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 IGLV1-47P01700 117 aa13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 UBE2E1P51965 193 aa13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 KLF17Q5JT82 389 aaPredicted RBP13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 TOR2AQ5JU69 321 aa13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 SLC25A48Q6ZT89 311 aaKnown RBP13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 LINC00311Q8N616 119 aa13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 UBAC2Q8NBM4 344 aa13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 RNF141Q8WVD5 230 aa13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 EDARADDQ8WWZ3 215 aa13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 FBXL17Q9UF56 701 aa13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 ANK3Q12955 4377 aaKnown RBP13.73□□□□□ -0.21
EXOSC3-203ENST00000465229 A0A1W2PRD5 423 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 A0A1W2PRF3 423 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 A0A1W2PRM7 423 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 TOR1AO14656 332 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 ST8SIA5O15466 376 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 IGHV4-38-2P0DP08 117 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 PRRX1P54821 245 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 ZNF585BQ52M93 769 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 FAM74A1Q5RGS3 127 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 BEND2Q8NDZ0 799 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 ABHD14AQ9BUJ0 271 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 ARV1Q9H2C2 271 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 YAE1D1Q9NRH1 226 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 RNF150Q9ULK6 438 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 MXRA5Q9NR99 2828 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 IGHV3OR16-10A0A075B7F0 116 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 TRAV40A0A0B4J280 105 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 ODF3BA8MYP8 253 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 I3L521 148 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 IGKV1-39P01597 117 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 IGKV1D-39P04432 117 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 ARG1P05089 322 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 FGF2P09038 288 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 CATR1Q13166 79 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 RPL7L1Q6DKI1 246 aaKnown RBP13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 ZNF66Q6ZN08 573 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 OR2C3Q8N628 320 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 OR4P4Q8NGL7 312 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 GPR146Q96CH1 333 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 OR2D2Q9H210 308 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 IFI27L2Q9H2X8 130 aa13.72□□□□□ -0.21
EXOSC3-203ENST00000465229 IGHV1-69DA0A0B4J2H0 117 aa13.71□□□□□ -0.22
EXOSC3-203ENST00000465229 IGHV1-69P01742 117 aa13.71□□□□□ -0.22
EXOSC3-203ENST00000465229 HLA-DRB5Q30154 266 aa13.71□□□□□ -0.22
EXOSC3-203ENST00000465229 LDLRAD2Q5SZI1 272 aa13.71□□□□□ -0.22
EXOSC3-203ENST00000465229 SLC25A31Q9H0C2 315 aa13.71□□□□□ -0.22
EXOSC3-203ENST00000465229 LYRM2Q9NU23 88 aaPredicted RBP13.71□□□□□ -0.22
EXOSC3-203ENST00000465229 NUDT19A8MXV4 375 aa13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 ATG12O94817 140 aa13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 FSHBP01225 129 aa13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 FAM157CP0CG43 387 aa13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 RAB7AP51149 207 aa13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 POLR2GP62487 172 aaKnown RBP eCLIP13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 CXorf66Q5JRM2 361 aaPredicted RBP13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 ODF3L1Q8IXM7 274 aa13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 PIP4P2Q8N4L2 257 aa13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 OR10X1Q8NGY0 326 aa13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 TMED6Q8WW62 240 aa13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 SAT2Q96F10 170 aaPredicted RBP13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 HSD17B10Q99714 261 aaKnown RBP13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 COA4Q9NYJ1 87 aa13.7□□□□□ -0.22
EXOSC3-203ENST00000465229 BORCS7-ASMTA0A0B4J1R7 106 aa13.69□□□□□ -0.22
EXOSC3-203ENST00000465229 BUB1B-PAK6H3BSN5 160 aa13.69□□□□□ -0.22
EXOSC3-203ENST00000465229 SHOXO15266 292 aa13.69□□□□□ -0.22
EXOSC3-203ENST00000465229 VAMP2P63027 116 aa13.69□□□□□ -0.22
EXOSC3-203ENST00000465229 FAM120AOSQ5T036 256 aa13.69□□□□□ -0.22
EXOSC3-203ENST00000465229 CLEC9AQ6UXN8 241 aa13.69□□□□□ -0.22
EXOSC3-203ENST00000465229 LHFPL4Q7Z7J7 247 aa13.69□□□□□ -0.22
EXOSC3-203ENST00000465229 LYG1Q8N1E2 194 aa13.69□□□□□ -0.22
EXOSC3-203ENST00000465229 NANPQ8TBE9 248 aa13.69□□□□□ -0.22
EXOSC3-203ENST00000465229 GSX1Q9H4S2 264 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms