RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 SSX5O60225 188 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 FCGR3BO75015 233 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 IGLV2-14P01704 120 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 CLEC2LP0C7M8 214 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 OR9G9P0C7N8 305 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 GP9P14770 177 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 SPNP16150 400 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 CBX5P45973 191 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 MSMO1Q15800 293 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 TNXAQ16473 311 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 TIMM50Q3ZCQ8 353 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 IDNKQ5T6J7 187 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 ZNF66Q6ZN08 573 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 KCTD9Q7L273 389 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 OVCH2Q7RTZ1 564 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 HOGA1Q86XE5 327 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 ANKRD13BQ86YJ7 626 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 MFSD4AQ8N468 514 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 TTC9CQ8N5M4 171 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 ZBTB34Q8NCN2 500 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 ADAD2Q8NCV1 583 aaKnown RBP5.59□□□□□ -1.51
PTPRF-210ENST00000463041 BEST4Q8NFU0 473 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 OR5H6Q8NGV6 325 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 VSTM2AQ8TAG5 236 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 LGALS14Q8TCE9 139 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 NUDCD2Q8WVJ2 157 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 SRSF12Q8WXF0 261 aaKnown RBP5.59□□□□□ -1.51
PTPRF-210ENST00000463041 SNAPC3Q92966 411 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 RNF167Q9H6Y7 350 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 COA4Q9NYJ1 87 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 SPATA2Q9UM82 520 aa5.59□□□□□ -1.51
PTPRF-210ENST00000463041 A0A087WXM4 84 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 TRBV9A0A0B4J1U6 114 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 IGKV1D-13A0A0B4J2D9 117 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 FAM223BA6NKX1 122 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 H0Y980 276 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 MPPED1O15442 326 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 XRCC3O43542 346 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 OR2A4O95047 310 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 HRASP01112 189 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 IGLV1-51P01701 117 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 SAA1P0DJI8 122 aaPredicted RBP5.58□□□□□ -1.52
PTPRF-210ENST00000463041 IGKV1-13P0DP09 117 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 FCGR2CP31995 323 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 MAS1LP35410 378 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 KIR2DS2P43631 304 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 ARPC4P59998 168 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 RPL30P62888 115 aaKnown RBP5.58□□□□□ -1.52
PTPRF-210ENST00000463041 ATP5G2Q06055 141 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 EIF4EBP1Q13541 118 aaPredicted RBP5.58□□□□□ -1.52
PTPRF-210ENST00000463041 NEDD8Q15843 81 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 FAM209BQ5JX69 171 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 IDO2Q6ZQW0 420 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 FAM223AQ8IWN6 122 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 OR4S2Q8NH73 311 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 GIMAP1Q8WWP7 306 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 ACOT12Q8WYK0 555 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 SLC25A38Q96DW6 304 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 S100A16Q96FQ6 103 aaKnown RBP5.58□□□□□ -1.52
PTPRF-210ENST00000463041 OR2A7Q96R45 310 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 ASCL2Q99929 193 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 AUNIPQ9H7T9 357 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 ZNF430Q9H8G1 570 aaPredicted RBP5.58□□□□□ -1.52
PTPRF-210ENST00000463041 SIGLEC8Q9NYZ4 499 aa5.58□□□□□ -1.52
PTPRF-210ENST00000463041 AIREO43918 545 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 RPS19P39019 145 aaKnown RBP5.57□□□□□ -1.52
PTPRF-210ENST00000463041 BRWD1-AS2P59051 145 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 RHOGP84095 191 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 DYRK1AQ13627 763 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 RPEL1Q2QD12 228 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 DHRS11Q6UWP2 260 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 IL34Q6ZMJ4 242 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 PUSL1Q8N0Z8 303 aaKnown RBP5.57□□□□□ -1.52
PTPRF-210ENST00000463041 GVQW1Q8N7I0 195 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 NECAP1Q8NC96 275 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 OR5AP2Q8NGF4 316 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 OR9G4Q8NGQ1 327 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 TMEM167AQ8TBQ9 72 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 TCTEX1D2Q8WW35 142 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 BORCS5Q969J3 196 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 VCX3AQ9NNX9 186 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 AKIP1Q9NQ31 210 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 CCL28Q9NRJ3 127 aa5.57□□□□□ -1.52
PTPRF-210ENST00000463041 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.56□□□□□ -1.52
PTPRF-210ENST00000463041 DPPA5A6NC42 116 aa5.56□□□□□ -1.52
PTPRF-210ENST00000463041 NPIPB5A8MRT5 1133 aa5.56□□□□□ -1.52
PTPRF-210ENST00000463041 A8MZ25 164 aa5.56□□□□□ -1.52
PTPRF-210ENST00000463041 RBFOX2O43251 390 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPRF-210ENST00000463041 RBMXL2O75526 392 aaKnown RBP5.56□□□□□ -1.52
PTPRF-210ENST00000463041 KBTBD11O94819 623 aa5.56□□□□□ -1.52
PTPRF-210ENST00000463041 DHFRP00374 187 aa5.56□□□□□ -1.52
PTPRF-210ENST00000463041 PPYP01298 95 aa5.56□□□□□ -1.52
PTPRF-210ENST00000463041 CRYGCP07315 174 aa5.56□□□□□ -1.52
PTPRF-210ENST00000463041 CSN3P07498 182 aa5.56□□□□□ -1.52
PTPRF-210ENST00000463041 IL6RP08887 468 aaPredicted RBP5.56□□□□□ -1.52
PTPRF-210ENST00000463041 APELAP0DMC3 54 aa5.56□□□□□ -1.52
PTPRF-210ENST00000463041 RPL27AP46776 148 aaKnown RBP5.56□□□□□ -1.52
PTPRF-210ENST00000463041 MECP2P51608 486 aaKnown RBP5.56□□□□□ -1.52
PTPRF-210ENST00000463041 SYNJ2BPP57105 145 aa5.56□□□□□ -1.52
PTPRF-210ENST00000463041 KLK9Q2XQG4 91 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms