RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 EPHA8P29322 1005 aaPredicted RBP13.48□□□□□ -0.25
SMC4-204ENST00000462787 ZNF83P51522 516 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 MDP1Q86V88 176 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 HSPB7Q9UBY9 170 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 PDCD11Q14690 1871 aaKnown RBP13.48□□□□□ -0.25
SMC4-204ENST00000462787 TRAV9-2A0A087WT02 112 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 FBXW9Q5XUX1 488 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 PLXNA1Q9UIW2 1896 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 RTN4RQ9BZR6 473 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 ZNF638Q14966 1978 aaKnown RBP13.47□□□□□ -0.25
SMC4-204ENST00000462787 H3BVH4 76 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 CTSBP07858 339 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 IL6RP08887 468 aaPredicted RBP13.47□□□□□ -0.25
SMC4-204ENST00000462787 TFF3Q07654 80 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 GATAD1Q8WUU5 269 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 KIR2DL2P43627 348 aaPredicted RBP13.47□□□□□ -0.25
SMC4-204ENST00000462787 RPL30P62888 115 aaKnown RBP13.47□□□□□ -0.25
SMC4-204ENST00000462787 A8MWP6 167 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 PROB1E7EW31 1015 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 OTOFQ9HC10 1997 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 ODAMA1E959 279 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 TMEM189A5PLL7 270 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 GZMBP10144 247 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 TCF23Q7RTU1 214 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 CALHM1Q8IU99 346 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 SLC22A18ASQ8N1D0 253 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 GCSAMQ8N6F7 178 aa13.47□□□□□ -0.25
SMC4-204ENST00000462787 SEC16AO15027 2179 aa13.46□□□□□ -0.25
SMC4-204ENST00000462787 OR10J3Q5JRS4 329 aa13.46□□□□□ -0.25
SMC4-204ENST00000462787 SSBP3Q9BWW4 388 aaPredicted RBP13.46□□□□□ -0.25
SMC4-204ENST00000462787 hCG_38984A0A1B0GV85 526 aa13.46□□□□□ -0.25
SMC4-204ENST00000462787 GDF9O60383 454 aa13.46□□□□□ -0.25
SMC4-204ENST00000462787 ZNF324O75467 553 aaPredicted RBP13.46□□□□□ -0.25
SMC4-204ENST00000462787 IGHV2-5P01817 119 aa13.46□□□□□ -0.25
SMC4-204ENST00000462787 TFPI2P48307 235 aa13.46□□□□□ -0.25
SMC4-204ENST00000462787 PSMG4Q5JS54 123 aa13.46□□□□□ -0.25
SMC4-204ENST00000462787 SPINK14Q6IE38 97 aa13.46□□□□□ -0.25
SMC4-204ENST00000462787 RNF7Q9UBF6 113 aa13.46□□□□□ -0.25
SMC4-204ENST00000462787 SOX21Q9Y651 276 aaPredicted RBP13.46□□□□□ -0.25
SMC4-204ENST00000462787 IZUMO1RA6ND01 250 aa13.46□□□□□ -0.26
SMC4-204ENST00000462787 PATJQ8NI35 1801 aa13.46□□□□□ -0.26
SMC4-204ENST00000462787 IGKV1-9A0A0C4DH69 117 aa13.46□□□□□ -0.26
SMC4-204ENST00000462787 C17orf51A8MQB3 221 aa13.46□□□□□ -0.26
SMC4-204ENST00000462787 CKS2P33552 79 aa13.46□□□□□ -0.26
SMC4-204ENST00000462787 MOGAT3Q86VF5 341 aa13.46□□□□□ -0.26
SMC4-204ENST00000462787 TMEM208Q9BTX3 173 aa13.46□□□□□ -0.26
SMC4-204ENST00000462787 AP5S1Q9NUS5 200 aa13.46□□□□□ -0.26
SMC4-204ENST00000462787 C5orf67F2Z3F1 127 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 C1QTNF9P0C862 333 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 CFPP27918 469 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 ABHD12Q8N2K0 398 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 TDGF1P3P51864 188 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 MMDQ15546 238 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 FAM19A2Q8N3H0 131 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 PNKDQ8N490 385 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 OR51G1Q8NGK1 321 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 SCNM1Q9BWG6 230 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 GNB1LQ9BYB4 327 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 ALPK2Q86TB3 2170 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 A0A1W2PRS3 328 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 TGFBR3LH3BV60 316 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 HOXA4Q00056 320 aaPredicted RBP13.45□□□□□ -0.26
SMC4-204ENST00000462787 FOXL1Q12952 345 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 ACTL10Q5JWF8 245 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 DCAF10Q5QP82 559 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 C1orf174Q8IYL3 243 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 WDR31Q8NA23 367 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 PRRG2O14669 202 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 GNG7O60262 68 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 TSPAN7P41732 249 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 SAMD13Q5VXD3 122 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 TPRX1Q8N7U7 411 aa13.45□□□□□ -0.26
SMC4-204ENST00000462787 TMSB15BA0A087X1C1 80 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 TBR1Q16650 682 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 AGMATQ9BSE5 352 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 JPT1Q9UK76 154 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 HS3ST3B1Q9Y662 390 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 C1QTNF9BB2RNN3 333 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 FAM222BQ8WU58 562 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 CHRNA10Q9GZZ6 450 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 MPV17P39210 176 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 ZNF146Q15072 292 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 HES3Q5TGS1 186 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 TRAV17A0A0B4J275 112 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 MAGEA5P43359 124 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 RND2P52198 227 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 LDLRAD2Q5SZI1 272 aa13.44□□□□□ -0.26
SMC4-204ENST00000462787 RNASEH2CQ8TDP1 164 aaKnown RBP13.44□□□□□ -0.26
SMC4-204ENST00000462787 LCTP09848 1927 aa13.43□□□□□ -0.26
SMC4-204ENST00000462787 IGKV1D-8A0A087WSZ0 117 aa13.43□□□□□ -0.26
SMC4-204ENST00000462787 C9JQL5 133 aa13.43□□□□□ -0.26
SMC4-204ENST00000462787 HIST1H4GQ99525 98 aa13.43□□□□□ -0.26
SMC4-204ENST00000462787 MRPL13Q9BYD1 178 aaKnown RBP13.43□□□□□ -0.26
SMC4-204ENST00000462787 TCFL5Q9UL49 500 aa13.43□□□□□ -0.26
SMC4-204ENST00000462787 TWIST1Q15672 202 aa13.43□□□□□ -0.26
SMC4-204ENST00000462787 ST6GALNAC3Q8NDV1 305 aa13.43□□□□□ -0.26
SMC4-204ENST00000462787 ST6GALNAC6Q969X2 333 aa13.43□□□□□ -0.26
SMC4-204ENST00000462787 SYNGR3O43761 229 aa13.43□□□□□ -0.26
SMC4-204ENST00000462787 OR5P3Q8WZ94 311 aa13.43□□□□□ -0.26
SMC4-204ENST00000462787 MAP1LC3AQ9H492 121 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms