RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 TMEM30BQ3MIR4 351 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 C1QL4Q86Z23 238 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 TMEM252Q8N6L7 170 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 GINS3Q9BRX5 216 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 LINC00574Q9H8X3 128 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 MMP23AO75900 390 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 P0C879 139 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 GNG10P50151 68 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 PAX9P55771 341 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 MEF2CQ06413 473 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-213ENST00000462730 RHEBQ15382 184 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 LRRC10Q5BKY1 277 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 CT45A1Q5HYN5 189 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 DNLZQ5SXM8 178 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 C11orf71Q6IPW1 123 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 CT45A3Q8NHU0 189 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 NANPQ8TBE9 248 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 H1FXQ92522 213 aaKnown RBP11.92□□□□□ -0.5
HDAC6-213ENST00000462730 TMPRSS5Q9H3S3 457 aa11.92□□□□□ -0.5
HDAC6-213ENST00000462730 LRBAP50851 2863 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 USF3Q68DE3 2245 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 C7orf77A4D0Y5 90 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 SNRNP70P08621 437 aaKnown RBP11.91□□□□□ -0.5
HDAC6-213ENST00000462730 IAPPP10997 89 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 MAS1LP35410 378 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 CAMLGP49069 296 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 FHITP49789 147 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 RAB5CP51148 216 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 RPL23AP62750 156 aaKnown RBP11.91□□□□□ -0.5
HDAC6-213ENST00000462730 ODF3L1Q8IXM7 274 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 ZNF295-AS1Q8N0V1 137 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 ZNF439Q8NDP4 499 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 RAB40CQ96S21 281 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 EIF5A2Q9GZV4 153 aaKnown RBP11.91□□□□□ -0.5
HDAC6-213ENST00000462730 GAL3ST2Q9H3Q3 398 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 CTSZQ9UBR2 303 aa11.91□□□□□ -0.5
HDAC6-213ENST00000462730 RALYQ9UKM9 306 aaKnown RBP11.91□□□□□ -0.5
HDAC6-213ENST00000462730 LYNX1G3V0Z9 82 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 SYNGR2O43760 224 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 FCGR3BO75015 233 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 CST7O76096 145 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 FBP1P09467 338 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 RNF224P0DH78 156 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 LYNX1P0DP58 116 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 CLINT1Q14677 625 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 CD300LFQ8TDQ1 290 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 RPUSD1Q9UJJ7 312 aaKnown RBP11.9□□□□□ -0.5
HDAC6-213ENST00000462730 LAMP3Q9UQV4 416 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 SAA2-SAA4A0A096LPE2 208 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 H3BP45 60 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 M0R036 132 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 DVL1O14640 695 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 RAB29O14966 203 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 SAA2P0DJI9 122 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-213ENST00000462730 CCL3L1P16619 93 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 COL8A2P25067 703 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 DYNLT3P51808 116 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 CD81P60033 236 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 BAXQ07812 192 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 C1orf229Q6ZS94 237 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-213ENST00000462730 H2BFWTQ7Z2G1 175 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-213ENST00000462730 ISOC2Q96AB3 205 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 ZNF714Q96N38 554 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 SH3BGRL3Q9H299 93 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 KAAG1Q9UBP8 84 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 GAB2Q9UQC2 676 aa11.9□□□□□ -0.5
HDAC6-213ENST00000462730 A0A1B0GW64 132 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 A0A1W2PPH5 198 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 FAM90A26D6RGX4 464 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 IGHV2-5P01817 119 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 PRH1P02810 166 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 MRPS11P82912 194 aaKnown RBP11.89□□□□□ -0.51
HDAC6-213ENST00000462730 TMEM267Q0VDI3 215 aaPredicted RBP11.89□□□□□ -0.51
HDAC6-213ENST00000462730 TMEM200BQ69YZ2 307 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 RBMS3Q6XE24 437 aaKnown RBP11.89□□□□□ -0.51
HDAC6-213ENST00000462730 DTX2Q86UW9 622 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 LYG1Q8N1E2 194 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 LFNGQ8NES3 379 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 R3HDM4Q96D70 268 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 C20orf24Q9BUV8 137 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 RAB1BQ9H0U4 201 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 NIT2Q9NQR4 276 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 PSENENQ9NZ42 101 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 STRAPQ9Y3F4 350 aaKnown RBP11.89□□□□□ -0.51
HDAC6-213ENST00000462730 DMRT1Q9Y5R6 373 aa11.89□□□□□ -0.51
HDAC6-213ENST00000462730 UMAD1C9J7I0 102 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 TXNL1O43396 289 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 IFNA17P01571 189 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 KIR2DS2P43631 304 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 ERVFRD-1P60508 538 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 ANKRD39Q53RE8 183 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 TMEM217Q8N7C4 229 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 OR10A7Q8NGE5 316 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 OR5C1Q8NGR4 320 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 S1PR3Q99500 378 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 RBKSQ9H477 322 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 UBTD1Q9HAC8 227 aa11.88□□□□□ -0.51
HDAC6-213ENST00000462730 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.88□□□□□ -0.51
HDAC6-213ENST00000462730 WSB1Q9Y6I7 421 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms