RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 OR52I1Q8NGK6 324 aa11.14□□□□□ -0.63
APP-211ENST00000462267 RNF126Q9BV68 326 aa11.14□□□□□ -0.63
APP-211ENST00000462267 AMBNQ9NP70 447 aa11.14□□□□□ -0.63
APP-211ENST00000462267 SDHAF2Q9NX18 166 aa11.14□□□□□ -0.63
APP-211ENST00000462267 RDH8Q9NYR8 311 aa11.14□□□□□ -0.63
APP-211ENST00000462267 TRBV5-7A0A0A0MS05 114 aa11.13□□□□□ -0.63
APP-211ENST00000462267 TRAV10A0A0B4J240 114 aa11.13□□□□□ -0.63
APP-211ENST00000462267 NPIPB5A8MRT5 1133 aa11.13□□□□□ -0.63
APP-211ENST00000462267 CLEC3BP05452 202 aa11.13□□□□□ -0.63
APP-211ENST00000462267 UBBP0CG47 229 aa11.13□□□□□ -0.63
APP-211ENST00000462267 RPS27AP62979 156 aaKnown RBP11.13□□□□□ -0.63
APP-211ENST00000462267 YIF1BQ5BJH7 314 aa11.13□□□□□ -0.63
APP-211ENST00000462267 NKAIN3Q8N8D7 197 aa11.13□□□□□ -0.63
APP-211ENST00000462267 OSR1Q8TAX0 266 aaPredicted RBP11.13□□□□□ -0.63
APP-211ENST00000462267 Q96MT0 163 aa11.13□□□□□ -0.63
APP-211ENST00000462267 FANCD2OSQ96PS1 177 aa11.13□□□□□ -0.63
APP-211ENST00000462267 MRPS18AQ9NVS2 196 aaKnown RBP11.13□□□□□ -0.63
APP-211ENST00000462267 PLEKHJ1Q9NW61 149 aa11.13□□□□□ -0.63
APP-211ENST00000462267 OAZ3Q9UMX2 235 aa11.13□□□□□ -0.63
APP-211ENST00000462267 S4R3C0 116 aa11.13□□□□□ -0.63
APP-211ENST00000462267 TRBV7-1A0A0A6YYK4 115 aa11.12□□□□□ -0.63
APP-211ENST00000462267 DPPA5A6NC42 116 aa11.12□□□□□ -0.63
APP-211ENST00000462267 FCGR1AP12314 374 aa11.12□□□□□ -0.63
APP-211ENST00000462267 GABRB1P18505 474 aa11.12□□□□□ -0.63
APP-211ENST00000462267 HTR2CP28335 458 aa11.12□□□□□ -0.63
APP-211ENST00000462267 RPS11P62280 158 aaKnown RBP eCLIP11.12□□□□□ -0.63
APP-211ENST00000462267 CDK10Q15131 360 aa11.12□□□□□ -0.63
APP-211ENST00000462267 KLK9Q2XQG4 91 aa11.12□□□□□ -0.63
APP-211ENST00000462267 SOHLH1Q5JUK2 328 aa11.12□□□□□ -0.63
APP-211ENST00000462267 C10orf55Q5SWW7 151 aa11.12□□□□□ -0.63
APP-211ENST00000462267 TMPRSS11AQ6ZMR5 421 aa11.12□□□□□ -0.63
APP-211ENST00000462267 CEACAM19Q7Z692 300 aa11.12□□□□□ -0.63
APP-211ENST00000462267 Q8N1X5 172 aa11.12□□□□□ -0.63
APP-211ENST00000462267 SLC29A1Q99808 456 aa11.12□□□□□ -0.63
APP-211ENST00000462267 OR2D2Q9H210 308 aa11.12□□□□□ -0.63
APP-211ENST00000462267 Q9N2K0 584 aa11.12□□□□□ -0.63
APP-211ENST00000462267 KLK9Q9UKQ9 250 aa11.12□□□□□ -0.63
APP-211ENST00000462267 AP4S1Q9Y587 144 aa11.12□□□□□ -0.63
APP-211ENST00000462267 LRP1BQ9NZR2 4599 aa11.11□□□□□ -0.63
APP-211ENST00000462267 IGKV1-6A0A0C4DH72 117 aa11.11□□□□□ -0.63
APP-211ENST00000462267 A0A1W2PPK0 400 aa11.11□□□□□ -0.63
APP-211ENST00000462267 HMX3A6NHT5 357 aa11.11□□□□□ -0.63
APP-211ENST00000462267 GYG2O15488 501 aa11.11□□□□□ -0.63
APP-211ENST00000462267 CRYZL1O95825 349 aa11.11□□□□□ -0.63
APP-211ENST00000462267 DHFRP00374 187 aa11.11□□□□□ -0.63
APP-211ENST00000462267 HLA-DMBP28068 263 aa11.11□□□□□ -0.63
APP-211ENST00000462267 SERPINB10P48595 397 aa11.11□□□□□ -0.63
APP-211ENST00000462267 CMC4P56277 68 aaPredicted RBP11.11□□□□□ -0.63
APP-211ENST00000462267 DNAL1Q4LDG9 190 aa11.11□□□□□ -0.63
APP-211ENST00000462267 APRG1Q8IVJ8 170 aa11.11□□□□□ -0.63
APP-211ENST00000462267 ADTRPQ96IZ2 230 aa11.11□□□□□ -0.63
APP-211ENST00000462267 FYTTD1Q96QD9 318 aaKnown RBP11.11□□□□□ -0.63
APP-211ENST00000462267 TM2D1Q9BX74 207 aa11.11□□□□□ -0.63
APP-211ENST00000462267 TMEM59Q9BXS4 323 aa11.11□□□□□ -0.63
APP-211ENST00000462267 BABAM2Q9NXR7 383 aa11.11□□□□□ -0.63
APP-211ENST00000462267 ORC6Q9Y5N6 252 aa11.11□□□□□ -0.63
APP-211ENST00000462267 DMBT1Q9UGM3 2413 aaPredicted RBP11.1□□□□□ -0.63
APP-211ENST00000462267 TEX22C9J3V5 150 aa11.1□□□□□ -0.63
APP-211ENST00000462267 CRYGCP07315 174 aa11.1□□□□□ -0.63
APP-211ENST00000462267 SAA1P0DJI8 122 aaPredicted RBP11.1□□□□□ -0.63
APP-211ENST00000462267 HIST1H1BP16401 226 aaKnown RBP11.1□□□□□ -0.63
APP-211ENST00000462267 TMEM187Q14656 261 aa11.1□□□□□ -0.63
APP-211ENST00000462267 OR2G6Q5TZ20 316 aa11.1□□□□□ -0.63
APP-211ENST00000462267 OR10K2Q6IF99 312 aa11.1□□□□□ -0.63
APP-211ENST00000462267 C19orf35Q6ZS72 473 aa11.1□□□□□ -0.63
APP-211ENST00000462267 CENPSQ8N2Z9 138 aa11.1□□□□□ -0.63
APP-211ENST00000462267 CENPNQ96H22 339 aaPredicted RBP11.1□□□□□ -0.63
APP-211ENST00000462267 CXorf58Q96LI9 332 aa11.1□□□□□ -0.63
APP-211ENST00000462267 HDHD3Q9BSH5 251 aaPredicted RBP11.1□□□□□ -0.63
APP-211ENST00000462267 SLC2A9Q9NRM0 540 aa11.1□□□□□ -0.63
APP-211ENST00000462267 AK3Q9UIJ7 227 aa11.1□□□□□ -0.63
APP-211ENST00000462267 C16orf90A8MZG2 172 aa11.09□□□□□ -0.63
APP-211ENST00000462267 AMBPP02760 352 aa11.09□□□□□ -0.63
APP-211ENST00000462267 ALPLP05186 524 aa11.09□□□□□ -0.63
APP-211ENST00000462267 SRMP19623 302 aa11.09□□□□□ -0.63
APP-211ENST00000462267 PLET1Q6UQ28 207 aa11.09□□□□□ -0.63
APP-211ENST00000462267 Q6ZR54 194 aa11.09□□□□□ -0.63
APP-211ENST00000462267 Q6ZTC4 211 aa11.09□□□□□ -0.63
APP-211ENST00000462267 Q8NAQ8 132 aa11.09□□□□□ -0.63
APP-211ENST00000462267 RHOXF1Q8NHV9 184 aa11.09□□□□□ -0.63
APP-211ENST00000462267 TMEM190Q8WZ59 177 aa11.09□□□□□ -0.63
APP-211ENST00000462267 C5orf30Q96GV9 206 aa11.09□□□□□ -0.63
APP-211ENST00000462267 NICN1Q9BSH3 213 aa11.09□□□□□ -0.63
APP-211ENST00000462267 ZNF436Q9C0F3 470 aaPredicted RBP11.09□□□□□ -0.63
APP-211ENST00000462267 FGF20Q9NP95 211 aaPredicted RBP11.09□□□□□ -0.63
APP-211ENST00000462267 C12orf4Q9NQ89 552 aa11.09□□□□□ -0.63
APP-211ENST00000462267 DAZ1Q9NQZ3 744 aaKnown RBP11.09□□□□□ -0.63
APP-211ENST00000462267 IGHV3-35A0A0C4DH35 117 aa11.08□□□□□ -0.64
APP-211ENST00000462267 SAC3D1A6NKF1 404 aa11.08□□□□□ -0.64
APP-211ENST00000462267 TRDCB7Z8K6 153 aa11.08□□□□□ -0.64
APP-211ENST00000462267 CA1P00915 261 aaPredicted RBP11.08□□□□□ -0.64
APP-211ENST00000462267 IL6RP08887 468 aaPredicted RBP11.08□□□□□ -0.64
APP-211ENST00000462267 GPR183P32249 361 aa11.08□□□□□ -0.64
APP-211ENST00000462267 DUTP33316 252 aaKnown RBP11.08□□□□□ -0.64
APP-211ENST00000462267 ETV1P50549 477 aa11.08□□□□□ -0.64
APP-211ENST00000462267 GNGT1P63211 74 aa11.08□□□□□ -0.64
APP-211ENST00000462267 GGHQ92820 318 aa11.08□□□□□ -0.64
APP-211ENST00000462267 PGLYRP3Q96LB9 341 aa11.08□□□□□ -0.64
APP-211ENST00000462267 DERL3Q96Q80 235 aa11.08□□□□□ -0.64
APP-211ENST00000462267 MFSD2BA6NFX1 497 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms