RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 PSG11Q9UQ72 335 aa15.36■□□□□ 0.05
HPS3-204ENST00000462030 MED13Q9UHV7 2174 aa15.36■□□□□ 0.05
HPS3-204ENST00000462030 COL27A1Q8IZC6 1860 aaPredicted RBP15.36■□□□□ 0.05
HPS3-204ENST00000462030 COL8A2P25067 703 aa15.36■□□□□ 0.05
HPS3-204ENST00000462030 RPL29P47914 159 aaKnown RBP15.36■□□□□ 0.05
HPS3-204ENST00000462030 THBS3P49746 956 aa15.36■□□□□ 0.05
HPS3-204ENST00000462030 PSG7Q13046 419 aa15.36■□□□□ 0.05
HPS3-204ENST00000462030 FIP1L1Q6UN15 594 aaKnown RBP15.36■□□□□ 0.05
HPS3-204ENST00000462030 CMTM2Q8TAZ6 248 aa15.36■□□□□ 0.05
HPS3-204ENST00000462030 R3HDM4Q96D70 268 aa15.36■□□□□ 0.05
HPS3-204ENST00000462030 METRNQ9UJH8 293 aa15.36■□□□□ 0.05
HPS3-204ENST00000462030 RRHO14718 337 aa15.35■□□□□ 0.05
HPS3-204ENST00000462030 KITLGP21583 273 aa15.35■□□□□ 0.05
HPS3-204ENST00000462030 LINC00310P59036 64 aa15.35■□□□□ 0.05
HPS3-204ENST00000462030 TMEM249Q2WGJ8 235 aa15.35■□□□□ 0.05
HPS3-204ENST00000462030 ZCCHC14Q8WYQ9 949 aaKnown RBP15.35■□□□□ 0.05
HPS3-204ENST00000462030 BTF3L4Q96K17 158 aa15.35■□□□□ 0.05
HPS3-204ENST00000462030 ZDHHC11Q9H8X9 412 aa15.35■□□□□ 0.05
HPS3-204ENST00000462030 CBLN1P23435 193 aa15.35■□□□□ 0.05
HPS3-204ENST00000462030 MIC13Q5XKP0 118 aa15.35■□□□□ 0.05
HPS3-204ENST00000462030 TREML4Q6UXN2 200 aa15.35■□□□□ 0.05
HPS3-204ENST00000462030 OR13A1Q8NGR1 328 aa15.35■□□□□ 0.05
HPS3-204ENST00000462030 OCC1Q8TAD7 63 aa15.35■□□□□ 0.05
HPS3-204ENST00000462030 TET2Q6N021 2002 aaPredicted RBP15.34■□□□□ 0.05
HPS3-204ENST00000462030 TIMP3P35625 211 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 MPV17P39210 176 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 YPEL3P61236 119 aaPredicted RBP15.34■□□□□ 0.05
HPS3-204ENST00000462030 LTC4SQ16873 150 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 TDRG1Q3Y452 100 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 Q6ZWC4 215 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 PLPPR2Q96GM1 343 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 MGST2Q99735 147 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 OBP2BQ9NPH6 170 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 WISP2O76076 250 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 FOXF2Q12947 444 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 TOMM20LQ6UXN7 152 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 C11orf53Q8IXP5 236 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 DCTN5Q9BTE1 182 aa15.34■□□□□ 0.05
HPS3-204ENST00000462030 URB1O60287 2271 aaKnown RBP15.33■□□□□ 0.05
HPS3-204ENST00000462030 IQCF6A8MYZ5 107 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 HPRT1P00492 218 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 STAG3L2P0CL84 134 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 STAG3L3P0CL85 134 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 CYB5R2Q6BCY4 276 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 ZNF705AQ6ZN79 300 aaPredicted RBP15.33■□□□□ 0.04
HPS3-204ENST00000462030 TCTEX1D1Q8N7M0 179 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 OR10G8Q8NGN5 311 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 MS4A5Q9H3V2 200 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 TMEM106BQ9NUM4 274 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 YTHDF2Q9Y5A9 579 aaKnown RBP15.33■□□□□ 0.04
HPS3-204ENST00000462030 AQP7O14520 342 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 YPEL1O60688 119 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 MEOX1P50221 254 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 UBE2NP61088 152 aaKnown RBP15.33■□□□□ 0.04
HPS3-204ENST00000462030 GABRA6Q16445 453 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 HLA-DRB5Q30154 266 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 YPEL2Q96QA6 119 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 HSD17B10Q99714 261 aaKnown RBP15.33■□□□□ 0.04
HPS3-204ENST00000462030 GGTLC1Q9BX51 225 aa15.33■□□□□ 0.04
HPS3-204ENST00000462030 SLC17A3O00476 420 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 OPRK1P41145 380 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 VKORC1L1Q8N0U8 176 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 Q8TCH9 128 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 K7EN84 100 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 FCGR3BO75015 233 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 PROP1O75360 226 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 CER1O95813 267 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 ZNF25P17030 456 aaPredicted RBP15.32■□□□□ 0.04
HPS3-204ENST00000462030 SELENOTP62341 195 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 PDLIM3Q53GG5 364 aaPredicted RBP15.32■□□□□ 0.04
HPS3-204ENST00000462030 PRAMEF6Q5VXH4 476 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 ACP7Q6ZNF0 438 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 TMEM68Q96MH6 324 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 FAM234AQ9H0X4 552 aa15.32■□□□□ 0.04
HPS3-204ENST00000462030 WDFY4Q6ZS81 3184 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 J3QW42 95 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 SERF1AO75920 110 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 FRMD6-AS1P0C7T7 363 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 ZNF90Q03938 601 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 MRPL49Q13405 166 aaKnown RBP15.31■□□□□ 0.04
HPS3-204ENST00000462030 PRAMEF5Q5TYX0 476 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 DEFB127Q9H1M4 99 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 PRSS46E5RG02 174 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 F2Z2F3 143 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 CXorf1O96002 111 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 CDKN1AP38936 164 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 ZNF718Q3SXZ3 478 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 TPTE2P1Q5T6R2 138 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 KLF14Q8TD94 323 aaPredicted RBP15.31■□□□□ 0.04
HPS3-204ENST00000462030 SSMEM1Q8WWF3 244 aa15.31■□□□□ 0.04
HPS3-204ENST00000462030 HEYLQ9NQ87 328 aaPredicted RBP15.31■□□□□ 0.04
HPS3-204ENST00000462030 PRR14LQ5THK1 2151 aa15.3■□□□□ 0.04
HPS3-204ENST00000462030 A6NNC1 897 aa15.3■□□□□ 0.04
HPS3-204ENST00000462030 MPDU1O75352 247 aa15.3■□□□□ 0.04
HPS3-204ENST00000462030 DUTP33316 252 aaKnown RBP15.3■□□□□ 0.04
HPS3-204ENST00000462030 SPATA31B1PQ5VZV4 182 aa15.3■□□□□ 0.04
HPS3-204ENST00000462030 MRPL18Q9H0U6 180 aaKnown RBP15.3■□□□□ 0.04
HPS3-204ENST00000462030 PARD6AQ9NPB6 346 aa15.3■□□□□ 0.04
HPS3-204ENST00000462030 ABI3Q9P2A4 366 aa15.3■□□□□ 0.04
HPS3-204ENST00000462030 TRAV3A0A0B4J244 114 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms