RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 CD300LFQ8TDQ1 290 aa8.92□□□□□ -0.98
SSBP1-202ENST00000461433 SCGB3A2Q96PL1 93 aa8.92□□□□□ -0.98
SSBP1-202ENST00000461433 TP53RKQ96S44 253 aa8.92□□□□□ -0.98
SSBP1-202ENST00000461433 RASL11BQ9BPW5 248 aa8.92□□□□□ -0.98
SSBP1-202ENST00000461433 HSPB9Q9BQS6 159 aa8.92□□□□□ -0.98
SSBP1-202ENST00000461433 PLEKHA2Q9HB19 425 aa8.92□□□□□ -0.98
SSBP1-202ENST00000461433 FAM212BQ9NTI7 297 aaPredicted RBP8.92□□□□□ -0.98
SSBP1-202ENST00000461433 SERTAD4Q9NUC0 356 aa8.92□□□□□ -0.98
SSBP1-202ENST00000461433 COPZ2Q9P299 210 aa8.92□□□□□ -0.98
SSBP1-202ENST00000461433 METTL1Q9UBP6 276 aaKnown RBP8.92□□□□□ -0.98
SSBP1-202ENST00000461433 C14orf166Q9Y224 244 aaKnown RBP8.92□□□□□ -0.98
SSBP1-202ENST00000461433 C3orf85A0A1B0GTC6 90 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 CRYM-AS1A6NIL9 109 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 IGKV1-39P01597 117 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 HLA-DRB1P01911 266 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 IGKV1D-39P04432 117 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 IL6RP08887 468 aaPredicted RBP8.91□□□□□ -0.98
SSBP1-202ENST00000461433 SAA1P0DJI8 122 aaPredicted RBP8.91□□□□□ -0.98
SSBP1-202ENST00000461433 SLC6A1P30531 599 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 LPAR6P43657 344 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 COMPP49747 757 aaPredicted RBP8.91□□□□□ -0.98
SSBP1-202ENST00000461433 UBE2KP61086 200 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 SUPT4H1P63272 117 aaKnown RBP8.91□□□□□ -0.98
SSBP1-202ENST00000461433 SSBP2P81877 361 aaPredicted RBP8.91□□□□□ -0.98
SSBP1-202ENST00000461433 PJVKQ0ZLH3 352 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 POU2AF1Q16633 256 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 TMEM95Q3KNT9 176 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 LIN54Q6MZP7 749 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 PUSL1Q8N0Z8 303 aaKnown RBP8.91□□□□□ -0.98
SSBP1-202ENST00000461433 CCDC71LQ8N9Z2 235 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 POC5Q8NA72 575 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 OR4F5Q8NH21 305 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 KIAA1456Q9P272 454 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 MMP24Q9Y5R2 645 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 IGHV7-81A0A0B4J1V7 117 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 CLPSL1A2RUU4 121 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 H0Y980 276 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 TAS2R31P59538 309 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 SP6Q3SY56 376 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 C9orf152Q5JTZ5 239 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 PPP1R27Q86WC6 154 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 TEX45Q8NA69 505 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 OR2T6Q8NHC8 308 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 GLYATL2Q8WU03 294 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 RHOVQ96L33 236 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 NAA60Q9H7X0 242 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 FLVCR2Q9UPI3 526 aa8.91□□□□□ -0.98
SSBP1-202ENST00000461433 HRASP01112 189 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 OR5AC1P0C628 307 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 NQO2P16083 231 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 AKR1C4P17516 323 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 UCP1P25874 307 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 PROK1P58294 105 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 NDPQ00604 133 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 DHODHQ02127 395 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 FOXL1Q12952 345 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 VMA21Q3ZAQ7 101 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 AWAT1Q58HT5 328 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 R3HDM4Q96D70 268 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 CLCC1Q96S66 551 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 TSC22D3Q99576 134 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 WNT10AQ9GZT5 417 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 BEX1Q9HBH7 125 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 COMMD9Q9P000 198 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 TNCP24821 2201 aa8.9□□□□□ -0.98
SSBP1-202ENST00000461433 TEX13DA0A0J9YY54 714 aaPredicted RBP8.89□□□□□ -0.99
SSBP1-202ENST00000461433 ARPC1BO15143 372 aaKnown RBP8.89□□□□□ -0.99
SSBP1-202ENST00000461433 OR2A4O95047 310 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 CA2P00918 260 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 TCRBP04435 133 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 EGR2P11161 476 aaPredicted RBP8.89□□□□□ -0.99
SSBP1-202ENST00000461433 CX3CL1P78423 397 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 PLGLAQ15195 96 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 OR4A47Q6IF82 309 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 SSX9Q7RTT3 188 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 SLC35E3Q7Z769 313 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 TMED4Q7Z7H5 227 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 SLC25A42Q86VD7 318 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 LHFPL5Q8TAF8 219 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 TMEM167AQ8TBQ9 72 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 WIPF2Q8TF74 440 aaPredicted RBP8.89□□□□□ -0.99
SSBP1-202ENST00000461433 GALNT14Q96FL9 552 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 SEC22AQ96IW7 307 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 OR2A7Q96R45 310 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 TMEM222Q9H0R3 208 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 FBXO7Q9Y3I1 522 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 RNF114Q9Y508 228 aa8.89□□□□□ -0.99
SSBP1-202ENST00000461433 TRAV3A0A0B4J244 114 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 A0A1B0GUS0 222 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 MARCH11A6NNE9 402 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 B3GALNT1O75752 331 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 KBTBD11O94819 623 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 CDS2O95674 445 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 KRASP01116 189 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 RPA2P15927 270 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 G6PCP35575 357 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 VDAC2P45880 294 aaPredicted RBP8.88□□□□□ -0.99
SSBP1-202ENST00000461433 KRTAP10-3P60369 221 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 TMEM187Q14656 261 aa8.88□□□□□ -0.99
SSBP1-202ENST00000461433 PRSS8Q16651 343 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms