RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 PARP11Q9NR21 331 aa10.41□□□□□ -0.74
RAB11FIP3-207ENST00000461009 NUDT19A8MXV4 375 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 M0QYG6 137 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 TNFSF12O43508 249 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 GSTZ1O43708 216 aaPredicted RBP10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 CREBL2O60519 120 aaPredicted RBP10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 CNIH1O95406 144 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 RAB3DO95716 219 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 HRASP01112 189 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 CD74P04233 296 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 IGLL1P15814 213 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 PTBP1P26599 531 aaKnown RBP eCLIP10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 UBE2KP61086 200 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 RPL30P62888 115 aaKnown RBP10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 CX3CL1P78423 397 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 MEF2DQ14814 521 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 SPANXN2Q5MJ10 180 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 STEAP1BQ6NZ63 245 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 ZNF329Q86UD4 541 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 SOSTQ9BQB4 213 aa10.4□□□□□ -0.74
RAB11FIP3-207ENST00000461009 SRRM4A7MD48 611 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 DISC1C4P0D8 188 aa10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 FCN1O00602 326 aa10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 RBFOX2O43251 390 aaKnown RBP eCLIP10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 IGLV2-23P01705 113 aa10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 PRB2P02812 416 aaPredicted RBP10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 AKAIN1P0CW23 69 aa10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 RPL23AP62750 156 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 PYDC2Q56P42 97 aa10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 OR2B11Q5JQS5 317 aa10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 AADACL3Q5VUY0 350 aa10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 SLC38A6Q8IZM9 456 aa10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 SPAG16Q8N0X2 631 aa10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 TCTEX1D1Q8N7M0 179 aa10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 VSTM2AQ8TAG5 236 aa10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 MCRIP2Q9BUT9 160 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 TINAGL1Q9GZM7 467 aaPredicted RBP10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 ZMAT5Q9UDW3 170 aaKnown RBP10.39□□□□□ -0.75
RAB11FIP3-207ENST00000461009 TRAV41A0A0B4J266 112 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 ATP6V0E1O15342 81 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 PGLYRP1O75594 196 aaPredicted RBP10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 HPRT1P00492 218 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 CA2P00918 260 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 CRYGBP07316 175 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 ELANEP08246 267 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 PGAM2P15259 253 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 ECI1P42126 302 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 FOXE3Q13461 319 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 FXYD3Q14802 87 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 CXorf66Q5JRM2 361 aaPredicted RBP10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 FOXB2Q5VYV0 432 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 TMEM65Q6PI78 240 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 C10orf99Q6UWK7 81 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 OR51H1Q8NH63 302 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 TERB2Q8NHR7 220 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 ZFAND1Q8TCF1 268 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 ZNF486Q96H40 463 aaPredicted RBP10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 GPHA2Q96T91 129 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 THAP7Q9BT49 309 aaPredicted RBP10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 RSRP1Q9BUV0 290 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 FXYD6Q9H0Q3 95 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 WSB1Q9Y6I7 421 aa10.38□□□□□ -0.75
RAB11FIP3-207ENST00000461009 ACTL6BO94805 426 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 OR2A4O95047 310 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 IGHG4P01861 327 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 SAA1P0DJI8 122 aaPredicted RBP10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 NQO2P16083 231 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 CD40LGP29965 261 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 MYCNOSP40205 109 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 CRIP2P52943 208 aaPredicted RBP10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 AP3S2P59780 193 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 GNB1P62873 340 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 SCGB2B2Q4G0G5 96 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 AKIRIN2Q53H80 203 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 CCDC190Q86UF4 302 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 MMD2Q8IY49 270 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 KLHL30-AS1Q8NEE0 82 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 TMEM68Q96MH6 324 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 OR2A7Q96R45 310 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 AURKAIP1Q9NWT8 199 aaPredicted RBP10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 NUBP2Q9Y5Y2 271 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 TNCP24821 2201 aa10.37□□□□□ -0.75
RAB11FIP3-207ENST00000461009 TGP01266 2768 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 ANKRD20A5PA0PJZ0 165 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 G3V318 75 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 RLN1P04808 185 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 F2RP25116 425 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 PPIFP30405 207 aaKnown RBP10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 FAUP35544 74 aaKnown RBP10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 ETV6P41212 452 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 BRWD1-AS2P59051 145 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 TAS2R31P59538 309 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 PRSS8Q16651 343 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 ECSCRQ19T08 205 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 PHLDA2Q53GA4 152 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 UNQ5815/PRO19632Q6UWF5 114 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 LHFPL1Q86WI0 220 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 ZNF695Q8IW36 515 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 Q8N402 240 aa10.36□□□□□ -0.75
RAB11FIP3-207ENST00000461009 OR6Q1Q8NGQ2 317 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms