RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 SYNJ2BPP57105 145 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 GNG2P59768 71 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 SFXN4Q6P4A7 337 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 CNIH2Q6PI25 160 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 FAM223AQ8IWN6 122 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 MMD2Q8IY49 270 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 Q8N1Y9 231 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 MUC7Q8TAX7 377 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 LGALS14Q8TCE9 139 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 SPIN2AQ99865 258 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 SPIN2BQ9BPZ2 258 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 Q9H521 79 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 ZNF430Q9H8G1 570 aaPredicted RBP17.39■□□□□ 0.37
PTPN4-207ENST00000460162 SSR3Q9UNL2 185 aa17.39■□□□□ 0.37
PTPN4-207ENST00000460162 H0Y980 276 aa17.38■□□□□ 0.37
PTPN4-207ENST00000460162 FCGR3BO75015 233 aa17.38■□□□□ 0.37
PTPN4-207ENST00000460162 OR2A4O95047 310 aa17.38■□□□□ 0.37
PTPN4-207ENST00000460162 TRBV12-3P01733 135 aa17.38■□□□□ 0.37
PTPN4-207ENST00000460162 TATDN3Q17R31 274 aa17.38■□□□□ 0.37
PTPN4-207ENST00000460162 RPEL1Q2QD12 228 aa17.38■□□□□ 0.37
PTPN4-207ENST00000460162 IL34Q6ZMJ4 242 aa17.38■□□□□ 0.37
PTPN4-207ENST00000460162 SIGLEC8Q9NYZ4 499 aa17.38■□□□□ 0.37
PTPN4-207ENST00000460162 ANXA10Q9UJ72 324 aa17.38■□□□□ 0.37
PTPN4-207ENST00000460162 RRP15Q9Y3B9 282 aaKnown RBP17.38■□□□□ 0.37
PTPN4-207ENST00000460162 J3QRK9 145 aa17.37■□□□□ 0.37
PTPN4-207ENST00000460162 RBMXL2O75526 392 aaKnown RBP17.37■□□□□ 0.37
PTPN4-207ENST00000460162 ATP6V1G2O95670 118 aa17.37■□□□□ 0.37
PTPN4-207ENST00000460162 IGLV2-14P01704 120 aa17.37■□□□□ 0.37
PTPN4-207ENST00000460162 SCAND1P57086 179 aa17.37■□□□□ 0.37
PTPN4-207ENST00000460162 OR4S2Q8NH73 311 aa17.37■□□□□ 0.37
PTPN4-207ENST00000460162 SNAPC3Q92966 411 aa17.37■□□□□ 0.37
PTPN4-207ENST00000460162 HSD17B10Q99714 261 aaKnown RBP17.37■□□□□ 0.37
PTPN4-207ENST00000460162 TM2D3Q9BRN9 247 aa17.37■□□□□ 0.37
PTPN4-207ENST00000460162 DCUN1D5Q9BTE7 237 aa17.37■□□□□ 0.37
PTPN4-207ENST00000460162 YTHDF1Q9BYJ9 559 aaKnown RBP17.37■□□□□ 0.37
PTPN4-207ENST00000460162 RHBDL2Q9NX52 303 aa17.37■□□□□ 0.37
PTPN4-207ENST00000460162 TRBV9A0A0B4J1U6 114 aa17.36■□□□□ 0.37
PTPN4-207ENST00000460162 TUSC2O75896 110 aa17.36■□□□□ 0.37
PTPN4-207ENST00000460162 RHOGP84095 191 aa17.36■□□□□ 0.37
PTPN4-207ENST00000460162 EXOSC2Q13868 293 aaKnown RBP17.36■□□□□ 0.37
PTPN4-207ENST00000460162 VSTM2AQ8TAG5 236 aa17.36■□□□□ 0.37
PTPN4-207ENST00000460162 AKIP1Q9NQ31 210 aa17.36■□□□□ 0.37
PTPN4-207ENST00000460162 C19orf73Q9NVV2 129 aa17.36■□□□□ 0.37
PTPN4-207ENST00000460162 IGKV1D-13A0A0B4J2D9 117 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 SSX5O60225 188 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 IGKV1-13P0DP09 117 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 RPL30P62888 115 aaKnown RBP17.35■□□□□ 0.37
PTPN4-207ENST00000460162 OR2B11Q5JQS5 317 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 C10orf55Q5SWW7 151 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 LCN12Q6JVE5 192 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 SLC25A42Q86VD7 318 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 Q8N402 240 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 TTC9CQ8N5M4 171 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 PEMTQ9UBM1 199 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 ADAM30Q9UKF2 790 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 ETV7Q9Y603 341 aa17.35■□□□□ 0.37
PTPN4-207ENST00000460162 KBTBD11O94819 623 aa17.34■□□□□ 0.37
PTPN4-207ENST00000460162 CSN3P07498 182 aa17.34■□□□□ 0.37
PTPN4-207ENST00000460162 ZNF45Q02386 682 aa17.34■□□□□ 0.37
PTPN4-207ENST00000460162 EIF4EBP1Q13541 118 aaPredicted RBP17.34■□□□□ 0.37
PTPN4-207ENST00000460162 FAM209BQ5JX69 171 aa17.34■□□□□ 0.37
PTPN4-207ENST00000460162 CASC10Q5T4H9 136 aa17.34■□□□□ 0.37
PTPN4-207ENST00000460162 ZNF773Q6PK81 442 aa17.34■□□□□ 0.37
PTPN4-207ENST00000460162 NECAP1Q8NC96 275 aa17.34■□□□□ 0.37
PTPN4-207ENST00000460162 TCTEX1D2Q8WW35 142 aa17.34■□□□□ 0.37
PTPN4-207ENST00000460162 OR51E2Q9H255 320 aa17.34■□□□□ 0.37
PTPN4-207ENST00000460162 ZNF257Q9Y2Q1 563 aa17.34■□□□□ 0.37
PTPN4-207ENST00000460162 AIREO43918 545 aa17.33■□□□□ 0.36
PTPN4-207ENST00000460162 PRH1P02810 166 aa17.33■□□□□ 0.36
PTPN4-207ENST00000460162 SDC2P34741 201 aa17.33■□□□□ 0.36
PTPN4-207ENST00000460162 ATP5G2Q06055 141 aa17.33■□□□□ 0.36
PTPN4-207ENST00000460162 ZNF66Q6ZN08 573 aa17.33■□□□□ 0.36
PTPN4-207ENST00000460162 GTSCR1Q86UQ5 136 aa17.33■□□□□ 0.36
PTPN4-207ENST00000460162 OR2K2Q8NGT1 345 aa17.33■□□□□ 0.36
PTPN4-207ENST00000460162 THAP7Q9BT49 309 aaPredicted RBP17.33■□□□□ 0.36
PTPN4-207ENST00000460162 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.32■□□□□ 0.36
PTPN4-207ENST00000460162 BMPR1BO00238 502 aa17.32■□□□□ 0.36
PTPN4-207ENST00000460162 MSMO1Q15800 293 aa17.32■□□□□ 0.36
PTPN4-207ENST00000460162 TMEM167AQ8TBQ9 72 aa17.32■□□□□ 0.36
PTPN4-207ENST00000460162 SLC25A38Q96DW6 304 aa17.32■□□□□ 0.36
PTPN4-207ENST00000460162 OR2A7Q96R45 310 aa17.32■□□□□ 0.36
PTPN4-207ENST00000460162 CITED4Q96RK1 184 aa17.32■□□□□ 0.36
PTPN4-207ENST00000460162 SPATA2Q9UM82 520 aa17.32■□□□□ 0.36
PTPN4-207ENST00000460162 A0A0A6YYH2 397 aa17.31■□□□□ 0.36
PTPN4-207ENST00000460162 A6NJ64 397 aa17.31■□□□□ 0.36
PTPN4-207ENST00000460162 MAS1LP35410 378 aa17.31■□□□□ 0.36
PTPN4-207ENST00000460162 ARPC4P59998 168 aa17.31■□□□□ 0.36
PTPN4-207ENST00000460162 MXD1Q05195 221 aa17.31■□□□□ 0.36
PTPN4-207ENST00000460162 VKORC1L1Q8N0U8 176 aa17.31■□□□□ 0.36
PTPN4-207ENST00000460162 PUSL1Q8N0Z8 303 aaKnown RBP17.31■□□□□ 0.36
PTPN4-207ENST00000460162 BEST4Q8NFU0 473 aa17.31■□□□□ 0.36
PTPN4-207ENST00000460162 TAS2R8Q9NYW2 309 aa17.31■□□□□ 0.36
PTPN4-207ENST00000460162 NPIPB5A8MRT5 1133 aa17.3■□□□□ 0.36
PTPN4-207ENST00000460162 TEX22C9J3V5 150 aa17.3■□□□□ 0.36
PTPN4-207ENST00000460162 KIR2DS2P43631 304 aa17.3■□□□□ 0.36
PTPN4-207ENST00000460162 RPL27AP46776 148 aaKnown RBP17.3■□□□□ 0.36
PTPN4-207ENST00000460162 C15orf32Q32M92 178 aa17.3■□□□□ 0.36
PTPN4-207ENST00000460162 MFSD4AQ8N468 514 aa17.3■□□□□ 0.36
PTPN4-207ENST00000460162 OR2J3O76001 311 aa17.29■□□□□ 0.36
PTPN4-207ENST00000460162 CLEC2LP0C7M8 214 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms