RNA–Protein interactions for RNA: ENST00000460023.5

CCDC78-205, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-205ENST00000460023 CMTM3Q96MX0 182 aa16.58■□□□□ 0.24
CCDC78-205ENST00000460023 SPIN2AQ99865 258 aa16.58■□□□□ 0.24
CCDC78-205ENST00000460023 B9D2Q9BPU9 175 aa16.58■□□□□ 0.24
CCDC78-205ENST00000460023 SPIN2BQ9BPZ2 258 aa16.58■□□□□ 0.24
CCDC78-205ENST00000460023 ZNF256Q9Y2P7 627 aaPredicted RBP16.58■□□□□ 0.24
CCDC78-205ENST00000460023 IGKV1D-13A0A0B4J2D9 117 aa16.57■□□□□ 0.24
CCDC78-205ENST00000460023 TRIM64CA6NLI5 447 aa16.57■□□□□ 0.24
CCDC78-205ENST00000460023 IGKV1-13P0DP09 117 aa16.57■□□□□ 0.24
CCDC78-205ENST00000460023 CD69Q07108 199 aa16.57■□□□□ 0.24
CCDC78-205ENST00000460023 TNXAQ16473 311 aa16.57■□□□□ 0.24
CCDC78-205ENST00000460023 GVQW1Q8N7I0 195 aa16.57■□□□□ 0.24
CCDC78-205ENST00000460023 SRSF12Q8WXF0 261 aaKnown RBP16.57■□□□□ 0.24
CCDC78-205ENST00000460023 TINAGL1Q9GZM7 467 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-205ENST00000460023 ALX4Q9H161 411 aaPredicted RBP16.57■□□□□ 0.24
CCDC78-205ENST00000460023 IGHV4OR15-8A0A075B7B6 117 aa16.56■□□□□ 0.24
CCDC78-205ENST00000460023 A0A087WW49 117 aa16.56■□□□□ 0.24
CCDC78-205ENST00000460023 HRASP01112 189 aa16.56■□□□□ 0.24
CCDC78-205ENST00000460023 IGHV3-11P01762 117 aa16.56■□□□□ 0.24
CCDC78-205ENST00000460023 ACSM6Q6P461 480 aa16.56■□□□□ 0.24
CCDC78-205ENST00000460023 SLC25A42Q86VD7 318 aa16.56■□□□□ 0.24
CCDC78-205ENST00000460023 TCTEX1D2Q8WW35 142 aa16.56■□□□□ 0.24
CCDC78-205ENST00000460023 ACOT12Q8WYK0 555 aa16.56■□□□□ 0.24
CCDC78-205ENST00000460023 SLC25A46Q96AG3 418 aa16.56■□□□□ 0.24
CCDC78-205ENST00000460023 ELOVL1Q9BW60 279 aa16.56■□□□□ 0.24
CCDC78-205ENST00000460023 MPPED1O15442 326 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 OR2A4O95047 310 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 PPYP01298 95 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 OR9G9P0C7N8 305 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 SAA1P0DJI8 122 aaPredicted RBP16.55■□□□□ 0.24
CCDC78-205ENST00000460023 MAS1LP35410 378 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 SLURP1P55000 103 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 RPL30P62888 115 aaKnown RBP16.55■□□□□ 0.24
CCDC78-205ENST00000460023 EIF4EBP1Q13541 118 aaPredicted RBP16.55■□□□□ 0.24
CCDC78-205ENST00000460023 MRGPRG-AS1Q2M3A8 158 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 FAM209BQ5JX69 171 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 TMEM69Q5SWH9 247 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 SAMD12Q8N8I0 201 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 OR6Q1Q8NGQ2 317 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 OR13F1Q8NGS4 319 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 OR2A7Q96R45 310 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 OR4C12Q96R67 309 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 ZNF430Q9H8G1 570 aaPredicted RBP16.55■□□□□ 0.24
CCDC78-205ENST00000460023 IFT46Q9NQC8 304 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 COA4Q9NYJ1 87 aa16.55■□□□□ 0.24
CCDC78-205ENST00000460023 LSM4Q9Y4Z0 139 aaKnown RBP16.55■□□□□ 0.24
CCDC78-205ENST00000460023 SMIM31A0A1B0GVY4 71 aa16.54■□□□□ 0.24
CCDC78-205ENST00000460023 SAP30O75446 220 aa16.54■□□□□ 0.24
CCDC78-205ENST00000460023 NHLRC4P0CG21 123 aaPredicted RBP16.54■□□□□ 0.24
CCDC78-205ENST00000460023 LSM3P62310 102 aaKnown RBP16.54■□□□□ 0.24
CCDC78-205ENST00000460023 CATR1Q13166 79 aa16.54■□□□□ 0.24
CCDC78-205ENST00000460023 TATDN3Q17R31 274 aa16.54■□□□□ 0.24
CCDC78-205ENST00000460023 IDO2Q6ZQW0 420 aa16.54■□□□□ 0.24
CCDC78-205ENST00000460023 SECTM1Q8WVN6 248 aa16.54■□□□□ 0.24
CCDC78-205ENST00000460023 TAS2R8Q9NYW2 309 aa16.54■□□□□ 0.24
CCDC78-205ENST00000460023 TNCP24821 2201 aa16.53■□□□□ 0.24
CCDC78-205ENST00000460023 RBFOX2O43251 390 aaKnown RBP eCLIP16.53■□□□□ 0.24
CCDC78-205ENST00000460023 VAX1Q5SQQ9 334 aa16.53■□□□□ 0.24
CCDC78-205ENST00000460023 DHRS11Q6UWP2 260 aa16.53■□□□□ 0.24
CCDC78-205ENST00000460023 ADAD2Q8NCV1 583 aaKnown RBP16.53■□□□□ 0.24
CCDC78-205ENST00000460023 CD300LFQ8TDQ1 290 aa16.53■□□□□ 0.24
CCDC78-205ENST00000460023 FUNDC2Q9BWH2 189 aa16.53■□□□□ 0.24
CCDC78-205ENST00000460023 SLC5A7Q9GZV3 580 aa16.53■□□□□ 0.24
CCDC78-205ENST00000460023 CCL28Q9NRJ3 127 aa16.53■□□□□ 0.24
CCDC78-205ENST00000460023 SORL1Q92673 2214 aa16.52■□□□□ 0.24
CCDC78-205ENST00000460023 FAM223BA6NKX1 122 aa16.52■□□□□ 0.24
CCDC78-205ENST00000460023 KBTBD11O94819 623 aa16.52■□□□□ 0.24
CCDC78-205ENST00000460023 PRSS3P35030 304 aa16.52■□□□□ 0.24
CCDC78-205ENST00000460023 TGFBR1P36897 503 aa16.52■□□□□ 0.24
CCDC78-205ENST00000460023 TAS2R46P59540 309 aa16.52■□□□□ 0.24
CCDC78-205ENST00000460023 ZNF343Q6P1L6 599 aa16.52■□□□□ 0.24
CCDC78-205ENST00000460023 FAM223AQ8IWN6 122 aa16.52■□□□□ 0.24
CCDC78-205ENST00000460023 TTC9CQ8N5M4 171 aa16.52■□□□□ 0.24
CCDC78-205ENST00000460023 OR4A5Q8NH83 315 aa16.52■□□□□ 0.24
CCDC78-205ENST00000460023 TMEM167AQ8TBQ9 72 aa16.52■□□□□ 0.24
CCDC78-205ENST00000460023 PEF1Q9UBV8 284 aaKnown RBP16.52■□□□□ 0.24
CCDC78-205ENST00000460023 APOA1P02647 267 aa16.51■□□□□ 0.23
CCDC78-205ENST00000460023 TAS2R20P59543 309 aa16.51■□□□□ 0.23
CCDC78-205ENST00000460023 OR2B11Q5JQS5 317 aa16.51■□□□□ 0.23
CCDC78-205ENST00000460023 PUSL1Q8N0Z8 303 aaKnown RBP16.51■□□□□ 0.23
CCDC78-205ENST00000460023 SNAPC3Q92966 411 aa16.51■□□□□ 0.23
CCDC78-205ENST00000460023 PRR25Q96S07 402 aa16.51■□□□□ 0.23
CCDC78-205ENST00000460023 HPRT1P00492 218 aa16.5■□□□□ 0.23
CCDC78-205ENST00000460023 NAT1P18440 290 aa16.5■□□□□ 0.23
CCDC78-205ENST00000460023 HERV-K104P61576 105 aa16.5■□□□□ 0.23
CCDC78-205ENST00000460023 SPAG16Q8N0X2 631 aa16.5■□□□□ 0.23
CCDC78-205ENST00000460023 ANAPC10Q9UM13 185 aa16.5■□□□□ 0.23
CCDC78-205ENST00000460023 ZNF257Q9Y2Q1 563 aa16.5■□□□□ 0.23
CCDC78-205ENST00000460023 TRBV9A0A0B4J1U6 114 aa16.49■□□□□ 0.23
CCDC78-205ENST00000460023 LY86O95711 162 aa16.49■□□□□ 0.23
CCDC78-205ENST00000460023 DHFRP00374 187 aa16.49■□□□□ 0.23
CCDC78-205ENST00000460023 PTHLHP12272 177 aa16.49■□□□□ 0.23
CCDC78-205ENST00000460023 RORCP51449 518 aa16.49■□□□□ 0.23
CCDC78-205ENST00000460023 BRWD1-AS2P59051 145 aa16.49■□□□□ 0.23
CCDC78-205ENST00000460023 TAS2R31P59538 309 aa16.49■□□□□ 0.23
CCDC78-205ENST00000460023 DYRK1AQ13627 763 aa16.49■□□□□ 0.23
CCDC78-205ENST00000460023 KLF5Q13887 457 aaPredicted RBP16.49■□□□□ 0.23
CCDC78-205ENST00000460023 NECAP1Q8NC96 275 aa16.49■□□□□ 0.23
CCDC78-205ENST00000460023 BET1LQ9NYM9 111 aa16.49■□□□□ 0.23
CCDC78-205ENST00000460023 EHFQ9NZC4 300 aa16.49■□□□□ 0.23
CCDC78-205ENST00000460023 SMAD5-AS1Q9Y6J3 95 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms